The 2.0 version of rSNPBase

Variant report

Variant rs13009977
Chromosome Location chr2:32915597-32915598
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32853600-32934600 Weak transcription Small Intestine intestine
2 chr2:32860600-32932000 Weak transcription Aorta Aorta
3 chr2:32868400-32922400 Weak transcription HSMMtube muscle
4 chr2:32868400-32950600 Weak transcription Esophagus oesophagus
5 chr2:32868800-32980800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr2:32869000-32936200 Weak transcription Brain Hippocampus Middle brain
7 chr2:32869000-32947800 Weak transcription Spleen Spleen
8 chr2:32869800-32964400 Weak transcription Fetal Brain Female brain
9 chr2:32871200-32928600 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr2:32876400-32980800 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr2:32878400-32936000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr2:32878400-32941000 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr2:32879400-32931400 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr2:32881800-32928400 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr2:32881800-32950600 Weak transcription Placenta Placenta
16 chr2:32882400-32929600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr2:32884200-32937200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr2:32884400-32928800 Weak transcription Stomach Smooth Muscle stomach
19 chr2:32888600-32943800 Weak transcription Right Ventricle heart
20 chr2:32888600-32981800 Weak transcription Gastric stomach
21 chr2:32890600-32927800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr2:32897200-32936200 Weak transcription Brain Cingulate Gyrus brain
23 chr2:32898400-32924200 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr2:32898400-32927800 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr2:32899000-32936200 Weak transcription Fetal Lung lung
26 chr2:32899000-32937600 Weak transcription Pancreas Pancrea
27 chr2:32900000-32974200 Weak transcription Fetal Intestine Large intestine
28 chr2:32900200-32921600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr2:32901400-32921800 Weak transcription K562 blood
30 chr2:32901800-32927800 Weak transcription Lung lung
31 chr2:32903400-32922200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr2:32903400-32928200 Weak transcription Fetal Intestine Small intestine
33 chr2:32903600-32927800 Weak transcription Fetal Muscle Leg muscle
34 chr2:32904400-32940400 Weak transcription Psoas Muscle Psoas
35 chr2:32904400-32969800 Weak transcription Fetal Kidney kidney
36 chr2:32904600-32929000 Weak transcription Primary hematopoietic stem cells blood
37 chr2:32904600-32929800 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr2:32904600-32941000 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr2:32904800-32932000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr2:32905000-32927800 Weak transcription Primary monocytes fromperipheralblood blood
41 chr2:32905200-32922000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr2:32905200-32928000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr2:32905200-32929000 Weak transcription Fetal Muscle Trunk muscle
44 chr2:32905600-32927400 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr2:32905800-32921800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr2:32905800-32927800 Weak transcription Duodenum Mucosa Duodenum
47 chr2:32906000-32922000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr2:32906200-32927800 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr2:32906200-32928000 Weak transcription Adipose Nuclei Adipose
50 chr2:32906200-32928600 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015