Variant report

Variant	rs13012187
Chromosome Location	chr2:40978146-40978147
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:30 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873911	chr2:40423454-41161464	ZNF genes & repeats Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv873917	chr2:40710953-41015998	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv528865	chr2:40805427-41218810	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv873926	chr2:40835285-40986860	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv873927	chr2:40835285-41034225	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	nsv470455	chr2:40835285-41059164	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	nsv873928	chr2:40835285-41075134	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
8	nsv873929	chr2:40835285-41180690	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
9	nsv456441	chr2:40882402-41064824	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
10	nsv581514	chr2:40882402-41064824	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
11	nsv456452	chr2:40890416-40989061	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
12	nsv581515	chr2:40890416-40989061	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
13	esv2547602	chr2:40976957-40978589	Weak transcription	n/a	n/a	inside rSNPs	n/a
14	esv6621	chr2:40977881-40978616	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
15	esv1948221	chr2:40977967-40978659	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
16	esv3457582	chr2:40978018-40978575	Weak transcription	n/a	n/a	inside rSNPs	n/a
17	esv3345726	chr2:40978039-40978570	Weak transcription	n/a	n/a	inside rSNPs	n/a
18	esv3509346	chr2:40978047-40978586	Weak transcription	n/a	n/a	inside rSNPs	n/a
19	esv3509348	chr2:40978070-40978506	Weak transcription	n/a	n/a	inside rSNPs	n/a
20	esv3457579	chr2:40978074-40978541	Weak transcription	n/a	n/a	inside rSNPs	n/a
21	esv3457581	chr2:40978080-40978544	Weak transcription	n/a	n/a	inside rSNPs	n/a
22	esv3509344	chr2:40978084-40978524	Weak transcription	n/a	n/a	inside rSNPs	n/a
23	esv3457583	chr2:40978085-40978497	Weak transcription	n/a	n/a	inside rSNPs	n/a
24	esv3509345	chr2:40978092-40978550	Weak transcription	n/a	n/a	inside rSNPs	n/a
25	esv3388377	chr2:40978101-40978491	Weak transcription	n/a	n/a	inside rSNPs	n/a
26	esv4273	chr2:40978103-40978657	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
27	esv3457580	chr2:40978126-40978476	Weak transcription	n/a	n/a	inside rSNPs	n/a
28	esv3509347	chr2:40978136-40978485	Weak transcription	n/a	n/a	inside rSNPs	n/a
29	esv3457584	chr2:40978140-40978483	Weak transcription	n/a	n/a	inside rSNPs	n/a
30	esv3509349	chr2:40978140-40978483	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:40975000-40979000	Weak transcription	Muscle Satellite Cultured Cells	--

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