Variant report

Variant	rs13012610
Chromosome Location	chr2:181628240-181628241
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs13023805	0.83[EUR][1000 genomes]
rs13030231	1.00[EUR][1000 genomes]
rs13034489	0.83[EUR][1000 genomes]
rs34637447	1.00[EUR][1000 genomes]
rs35482396	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834475	chr2:181537463-181724891	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:181625600-181630600	Enhancers	HepG2	liver
2	chr2:181627400-181629000	Enhancers	Fetal Lung	lung
3	chr2:181628000-181628400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr2:181628000-181628400	Enhancers	Rectal Mucosa Donor 31	rectum
5	chr2:181628000-181628800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr2:181628000-181628800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr2:181628000-181629000	Flanking Active TSS	A549	lung
8	chr2:181628000-181630200	Enhancers	Stomach Mucosa	stomach
9	chr2:181628200-181628600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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