Variant report

Variant	rs13015756
Chromosome Location	chr2:187636865-187636866
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs35616078	1.00[AFR][1000 genomes]
rs71432463	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428069	chr2:187575692-187766209	ZNF genes & repeats Weak transcription Active TSS Strong transcription Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	4 gene(s)	inside rSNPs	diseases
2	esv3495864	chr2:187633495-187686087	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	esv3495865	chr2:187633495-187686087	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:187636000-187637200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
2	chr2:187636000-187637200	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr2:187636200-187637000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr2:187636200-187637000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr2:187636200-187637000	Enhancers	Placenta Amnion	Placenta Amnion
6	chr2:187636200-187637600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr2:187636200-187637600	Enhancers	Placenta	Placenta
8	chr2:187636400-187637000	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr2:187636400-187637400	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr2:187636400-187637400	Enhancers	iPS-15b Cell Line	embryonic stem cell
11	chr2:187636600-187637400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr2:187636800-187637200	Enhancers	ES-I3 Cell Line	embryonic stem cell
13	chr2:187636800-187637200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr2:187636800-187637200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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