The 2.0 version of rSNPBase

Variant report

Variant rs13021299
Chromosome Location chr2:231356227-231356228
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231334800-231358400 Weak transcription Fetal Stomach stomach
2 chr2:231335000-231359000 Weak transcription NHLF lung
3 chr2:231336400-231363400 Weak transcription Fetal Lung lung
4 chr2:231336600-231363400 Weak transcription Right Ventricle heart
5 chr2:231336800-231376000 Weak transcription Colonic Mucosa Colon
6 chr2:231337800-231359200 Weak transcription HMEC breast
7 chr2:231338400-231376200 Weak transcription Placenta Amnion Placenta Amnion
8 chr2:231340000-231358800 Weak transcription Colon Smooth Muscle Colon
9 chr2:231340600-231361000 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr2:231341000-231361000 Strong transcription Primary B cells from peripheral blood blood
11 chr2:231344600-231356600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr2:231345400-231359200 Weak transcription HSMMtube muscle
13 chr2:231345600-231357600 Weak transcription NH-A brain
14 chr2:231345600-231358200 Weak transcription NHEK skin
15 chr2:231345600-231358400 Weak transcription Small Intestine intestine
16 chr2:231346600-231358200 Weak transcription Osteobl bone
17 chr2:231346600-231359200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr2:231346600-231370000 Weak transcription K562 blood
19 chr2:231347200-231363200 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr2:231348400-231361400 Strong transcription Primary T regulatory cells fromperipheralblood blood
21 chr2:231348800-231359600 Weak transcription HSMM muscle
22 chr2:231350600-231357800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr2:231350600-231360000 Strong transcription Primary T cells from cord blood blood
24 chr2:231350600-231361000 Strong transcription Primary T helper naive cells fromperipheralblood blood
25 chr2:231351200-231358400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr2:231352600-231376800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr2:231353200-231360000 Strong transcription Duodenum Smooth Muscle Duodenum
28 chr2:231353400-231357600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr2:231353400-231358600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr2:231354600-231360800 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr2:231354600-231361000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr2:231354800-231361200 Strong transcription Primary T cells fromperipheralblood blood
33 chr2:231355000-231357400 Strong transcription Ovary ovary
34 chr2:231355000-231360400 Strong transcription Primary B cells from cord blood blood
35 chr2:231355200-231357000 ZNF genes & repeats GM12878-XiMat blood
36 chr2:231355200-231357200 Strong transcription Primary neutrophils fromperipheralblood blood
37 chr2:231355200-231357400 Strong transcription Primary hematopoietic stem cells blood
38 chr2:231355200-231357400 Strong transcription Thymus Thymus
39 chr2:231355200-231360200 Strong transcription Primary T helper cells PMA-I stimulated --
40 chr2:231355200-231361000 Strong transcription Primary monocytes fromperipheralblood blood
41 chr2:231355200-231380400 Strong transcription Adipose Nuclei Adipose
42 chr2:231355400-231357200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
43 chr2:231355400-231357200 Strong transcription Dnd41 blood
44 chr2:231355400-231357600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr2:231355600-231356400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
46 chr2:231355600-231356600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr2:231355600-231357000 Strong transcription Rectal Mucosa Donor 29 rectum
48 chr2:231355600-231357400 ZNF genes & repeats Liver Liver
49 chr2:231355600-231357400 Strong transcription Fetal Adrenal Gland Adrenal Gland
50 chr2:231355600-231357600 Strong transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015