Variant report

Variant rs13029145
Chromosome Location chr2:33174050-33174051
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33173000-33174400 Bivalent/Poised TSS Fetal Brain Female brain
2 chr2:33173200-33174200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
3 chr2:33173200-33174400 Flanking Active TSS K562 blood
4 chr2:33173400-33174200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:33173400-33174200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
6 chr2:33173400-33174200 Enhancers Colonic Mucosa Colon
7 chr2:33173400-33174200 Enhancers Psoas Muscle Psoas
8 chr2:33173400-33176400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr2:33173400-33180800 Weak transcription Placenta Amnion Placenta Amnion
10 chr2:33173400-33182000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr2:33173400-33186200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr2:33173600-33174200 Enhancers H1 Cell Line embryonic stem cell
13 chr2:33173600-33174200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr2:33173600-33174200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
15 chr2:33173600-33174200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
16 chr2:33173600-33174200 Enhancers Fetal Stomach stomach
17 chr2:33173600-33174200 Enhancers Left Ventricle heart
18 chr2:33173600-33174200 Enhancers Skeletal Muscle Male skeletal muscle
19 chr2:33173600-33174200 Enhancers Skeletal Muscle Female skeletal muscle
20 chr2:33173600-33174400 Enhancers A549 lung
21 chr2:33173600-33175200 Weak transcription Fetal Kidney kidney
22 chr2:33173600-33177400 Weak transcription Rectal Smooth Muscle rectum
23 chr2:33173600-33187600 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr2:33173800-33174200 Bivalent Enhancer Fetal Muscle Leg muscle
25 chr2:33173800-33174400 Enhancers Placenta Placenta
26 chr2:33173800-33174400 Enhancers HUVEC blood vessel
27 chr2:33173800-33174600 Flanking Active TSS Stomach Smooth Muscle stomach
28 chr2:33173800-33175200 Flanking Active TSS Fetal Heart heart
29 chr2:33173800-33177400 Weak transcription Colon Smooth Muscle Colon
30 chr2:33173800-33179200 Enhancers Cortex derived primary cultured neurospheres brain
31 chr2:33173800-33192000 Weak transcription Liver Liver
32 chr2:33174000-33174200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
33 chr2:33174000-33174200 Enhancers iPS-18 Cell Line embryonic stem cell
34 chr2:33174000-33174200 Active TSS Brain Germinal Matrix brain
35 chr2:33174000-33174200 Enhancers Fetal Muscle Trunk muscle
36 chr2:33174000-33174200 Enhancers Right Atrium heart
37 chr2:33174000-33174400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr2:33174000-33174400 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
39 chr2:33174000-33174400 Enhancers Duodenum Smooth Muscle Duodenum
40 chr2:33174000-33174600 Enhancers Right Ventricle heart

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