Variant report

Variant rs13048551
Chromosome Location chr21:45567977-45567978
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:45558200-45573000 Weak transcription NH-A brain
2 chr21:45559600-45572800 Weak transcription Hela-S3 cervix
3 chr21:45559600-45573000 Weak transcription Placenta Amnion Placenta Amnion
4 chr21:45559600-45573000 Weak transcription HMEC breast
5 chr21:45560000-45568600 Enhancers Primary hematopoietic stem cells blood
6 chr21:45560400-45573200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr21:45560800-45568400 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr21:45561000-45573000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr21:45561000-45584400 Weak transcription Aorta Aorta
10 chr21:45561200-45574200 Weak transcription Fetal Brain Female brain
11 chr21:45561400-45573000 Weak transcription Small Intestine intestine
12 chr21:45561600-45568200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr21:45563800-45574800 Weak transcription NHLF lung
14 chr21:45564400-45568400 Enhancers Fetal Thymus thymus
15 chr21:45564600-45568000 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr21:45564600-45568600 Enhancers Placenta Placenta
17 chr21:45564800-45570400 Weak transcription Psoas Muscle Psoas
18 chr21:45565000-45568000 Enhancers Primary mononuclear cells fromperipheralblood Blood
19 chr21:45565000-45568400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr21:45565000-45568400 Enhancers Colonic Mucosa Colon
21 chr21:45565000-45573200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr21:45565200-45568000 Enhancers Stomach Mucosa stomach
23 chr21:45565400-45573000 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr21:45565400-45580600 Weak transcription Brain Germinal Matrix brain
25 chr21:45565600-45568600 Enhancers Primary B cells from cord blood blood
26 chr21:45565600-45569600 Enhancers Primary Natural Killer cells fromperipheralblood blood
27 chr21:45565600-45573000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr21:45565600-45573200 Weak transcription Colon Smooth Muscle Colon
29 chr21:45565800-45568200 Enhancers Primary hematopoietic stem cells short term culture blood
30 chr21:45565800-45568200 Enhancers Primary T helper naive cells from peripheral blood blood
31 chr21:45565800-45568200 Enhancers Primary T killer memory cells from peripheral blood blood
32 chr21:45566000-45568200 Enhancers Primary T cells from cord blood blood
33 chr21:45566000-45568600 Enhancers Primary T helper cells PMA-I stimulated --
34 chr21:45566000-45569000 Enhancers Primary T cells fromperipheralblood blood
35 chr21:45566200-45568000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
36 chr21:45566200-45568000 Enhancers Fetal Muscle Trunk muscle
37 chr21:45566200-45568600 Enhancers Primary T regulatory cells fromperipheralblood blood
38 chr21:45566400-45568400 Enhancers Brain Hippocampus Middle brain
39 chr21:45566400-45568600 Enhancers Primary T helper cells fromperipheralblood blood
40 chr21:45566400-45575000 Weak transcription Rectal Smooth Muscle rectum
41 chr21:45566600-45568400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
42 chr21:45566600-45568600 Enhancers Fetal Muscle Leg muscle
43 chr21:45566600-45568800 Enhancers Primary B cells from peripheral blood blood
44 chr21:45566600-45569400 Enhancers Primary T helper 17 cells PMA-I stimulated --
45 chr21:45566800-45568000 Enhancers Brain Anterior Caudate brain
46 chr21:45566800-45568200 Enhancers Fetal Stomach stomach
47 chr21:45566800-45568400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
48 chr21:45566800-45569400 Enhancers GM12878-XiMat blood
49 chr21:45567000-45568000 Enhancers Breast Myoepithelial Primary Cells Breast
50 chr21:45567000-45568800 Enhancers ES-UCSF4 Cell Line embryonic stem cell

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