Variant report

Variant rs13060282
Chromosome Location chr3:52923714-52923715
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52886600-52930200 Weak transcription Colonic Mucosa Colon
2 chr3:52887000-52926400 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr3:52892000-52926400 Weak transcription Rectal Smooth Muscle rectum
4 chr3:52895800-52923800 Weak transcription Brain Cingulate Gyrus brain
5 chr3:52895800-52925200 Weak transcription Esophagus oesophagus
6 chr3:52902200-52925200 Weak transcription Placenta Placenta
7 chr3:52906000-52924400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr3:52908000-52924000 Weak transcription Brain Hippocampus Middle brain
9 chr3:52908000-52924000 Weak transcription Brain Substantia Nigra brain
10 chr3:52908200-52925400 Weak transcription Brain Anterior Caudate brain
11 chr3:52908200-52925400 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr3:52908400-52924400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr3:52908400-52924600 Weak transcription NHLF lung
14 chr3:52908400-52930600 Weak transcription A549 lung
15 chr3:52908600-52924600 Weak transcription Muscle Satellite Cultured Cells --
16 chr3:52908600-52926000 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr3:52909200-52925200 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr3:52909600-52925400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr3:52909800-52925200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr3:52909800-52925400 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr3:52910000-52929400 Weak transcription HMEC breast
22 chr3:52910000-52930200 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr3:52910200-52925400 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr3:52910200-52929800 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr3:52910200-52930000 Weak transcription H9 Cell Line embryonic stem cell
26 chr3:52910200-52930000 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr3:52910200-52930000 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr3:52910400-52924800 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr3:52910400-52930200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr3:52910600-52926400 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr3:52913200-52926600 Weak transcription K562 blood
32 chr3:52913600-52924600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr3:52913600-52925200 Weak transcription Adipose Nuclei Adipose
34 chr3:52913800-52924200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr3:52914000-52924400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr3:52914400-52924000 Weak transcription HepG2 liver
37 chr3:52914600-52924800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr3:52914800-52924000 Weak transcription Brain Angular Gyrus brain
39 chr3:52914800-52924400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr3:52915000-52924600 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr3:52916400-52930600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr3:52916600-52924600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr3:52916600-52926000 Weak transcription Colon Smooth Muscle Colon
44 chr3:52917000-52926000 Weak transcription Psoas Muscle Psoas
45 chr3:52918400-52926000 Weak transcription Small Intestine intestine
46 chr3:52919200-52930200 Weak transcription Fetal Kidney kidney
47 chr3:52919800-52926000 Weak transcription HSMM muscle
48 chr3:52920000-52924400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr3:52920000-52924600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr3:52920000-52924800 Weak transcription NH-A brain

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