No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
nsv1007697 |
chr3:194554814-195009930 |
Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
28 gene(s)
|
inside rSNPs
|
diseases
|
2 |
nsv536873 |
chr3:194554814-195009930 |
Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
28 gene(s)
|
inside rSNPs
|
diseases
|
3 |
nsv1009796 |
chr3:194737333-195124248 |
Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
22 gene(s)
|
inside rSNPs
|
diseases
|
4 |
nsv1014826 |
chr3:194834615-195631793 |
Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
73 gene(s)
|
inside rSNPs
|
diseases
|
5 |
nsv536876 |
chr3:194834615-195631793 |
Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
73 gene(s)
|
inside rSNPs
|
diseases
|
6 |
nsv533904 |
chr3:194868329-195438728 |
Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
65 gene(s)
|
inside rSNPs
|
diseases
|
7 |
nsv1010168 |
chr3:194874494-195135790 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
21 gene(s)
|
inside rSNPs
|
diseases
|
8 |
nsv536877 |
chr3:194874494-195135790 |
Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
21 gene(s)
|
inside rSNPs
|
diseases
|
9 |
nsv997956 |
chr3:194879534-195087539 |
Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
20 gene(s)
|
inside rSNPs
|
diseases
|
10 |
nsv536878 |
chr3:194879534-195087539 |
Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
20 gene(s)
|
inside rSNPs
|
diseases
|
11 |
esv1832781 |
chr3:194902818-195528226 |
Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
62 gene(s)
|
inside rSNPs
|
diseases
|
12 |
nsv432508 |
chr3:194916131-195478861 |
Strong transcription Enhancers Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
59 gene(s)
|
inside rSNPs
|
diseases
|
13 |
nsv432510 |
chr3:194935314-195478861 |
Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
59 gene(s)
|
inside rSNPs
|
diseases
|
14 |
nsv1005519 |
chr3:194964301-195340515 |
Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
41 gene(s)
|
inside rSNPs
|
diseases
|
15 |
nsv432511 |
chr3:194986167-195479748 |
Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
57 gene(s)
|
inside rSNPs
|
diseases
|
16 |
esv1818370 |
chr3:194987569-194995096 |
Flanking Active TSS Genic enhancers Enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
17 |
esv1818606 |
chr3:194987569-194995096 |
Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
18 |
nsv592983 |
chr3:194987569-194995096 |
Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
19 |
esv1798889 |
chr3:194991331-194994754 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
20 |
esv1800536 |
chr3:194991331-194994754 |
Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
21 |
esv1809004 |
chr3:194991331-194994754 |
Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
22 |
esv1823800 |
chr3:194991331-194994754 |
Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
23 |
esv1835703 |
chr3:194991331-194994754 |
Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
24 |
esv1837832 |
chr3:194991331-194994754 |
Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
25 |
esv1849423 |
chr3:194991331-194994754 |
Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
26 |
nsv592987 |
chr3:194991331-194994754 |
Weak transcription Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
27 |
esv1793593 |
chr3:194991331-194995096 |
Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
28 |
esv1796280 |
chr3:194991331-194995096 |
Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
29 |
esv1797183 |
chr3:194991331-194995096 |
Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
30 |
esv1799490 |
chr3:194991331-194995096 |
Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
31 |
esv1803140 |
chr3:194991331-194995096 |
Flanking Active TSS Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
32 |
esv1803620 |
chr3:194991331-194995096 |
Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
33 |
esv1814464 |
chr3:194991331-194995096 |
Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
34 |
esv1816728 |
chr3:194991331-194995096 |
Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
35 |
esv1834379 |
chr3:194991331-194995096 |
Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
36 |
esv1835663 |
chr3:194991331-194995096 |
Weak transcription Active TSS Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
37 |
esv1840756 |
chr3:194991331-194995096 |
Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
38 |
esv1840801 |
chr3:194991331-194995096 |
Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
39 |
esv1841984 |
chr3:194991331-194995096 |
Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
40 |
esv1847389 |
chr3:194991331-194995096 |
Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
41 |
nsv592988 |
chr3:194991331-194995096 |
Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|
42 |
nsv592990 |
chr3:194991382-194995096 |
Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
inside rSNPs
|
n/a
|