Variant report

Variant	rs13103185
Chromosome Location	chr4:95275771-95275772
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10034781	0.82[CEU][hapmap]
rs11097408	0.82[CEU][hapmap]
rs12511433	0.83[CEU][hapmap]
rs13434570	0.83[CEU][hapmap]
rs1565062	0.83[CEU][hapmap]
rs17309887	0.91[CEU][hapmap]
rs183993	0.83[CEU][hapmap]
rs2632412	0.82[CEU][hapmap]
rs3113863	0.83[CEU][hapmap]
rs35744894	0.80[AMR][1000 genomes]
rs4235050	0.82[CEU][hapmap]
rs6532476	0.82[CEU][hapmap]
rs6823404	0.82[CEU][hapmap]
rs8336	0.82[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv993495	chr4:94992315-95482578	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	nsv594901	chr4:95254730-95493246	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
3	nsv1003743	chr4:95255957-95469831	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:95271600-95277200	Weak transcription	Placenta	Placenta
2	chr4:95273400-95276000	Enhancers	Primary hematopoietic stem cells	blood
3	chr4:95273400-95276200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr4:95273800-95275800	Enhancers	Dnd41	blood
5	chr4:95274000-95276000	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr4:95274000-95276400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr4:95274000-95279000	Weak transcription	HUVEC	blood vessel
8	chr4:95275400-95275800	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr4:95275600-95276000	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr4:95275600-95276000	Enhancers	Fetal Muscle Leg	muscle
11	chr4:95275600-95276000	Enhancers	Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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