Variant report
| Variant | rs13108355 |
|---|---|
| Chromosome Location | chr4:171303704-171303705 |
| allele | A/G/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:39)
| rs_ID | r2[population] |
|---|---|
| rs11132848 | 0.84[AFR][1000 genomes] |
| rs11132850 | 0.81[AFR][1000 genomes] |
| rs11727765 | 0.84[AFR][1000 genomes] |
| rs12640340 | 0.84[AFR][1000 genomes] |
| rs12715911 | 0.84[AFR][1000 genomes] |
| rs12715912 | 0.84[AFR][1000 genomes] |
| rs12715913 | 0.81[AFR][1000 genomes] |
| rs13108356 | 0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes] |
| rs13141317 | 0.84[AFR][1000 genomes] |
| rs13147596 | 0.81[AFR][1000 genomes] |
| rs13149636 | 0.84[AFR][1000 genomes] |
| rs13434911 | 0.84[AFR][1000 genomes] |
| rs13434915 | 0.84[AFR][1000 genomes] |
| rs1915539 | 0.80[AFR][1000 genomes] |
| rs2176964 | 0.84[AFR][1000 genomes] |
| rs2176966 | 0.84[AFR][1000 genomes] |
| rs2176967 | 0.84[AFR][1000 genomes] |
| rs2331912 | 0.84[AFR][1000 genomes] |
| rs2331914 | 0.84[AFR][1000 genomes] |
| rs2331915 | 0.84[AFR][1000 genomes] |
| rs2877518 | 0.84[AFR][1000 genomes] |
| rs4321601 | 0.84[AFR][1000 genomes] |
| rs4597785 | 0.84[AFR][1000 genomes] |
| rs4692604 | 0.84[AFR][1000 genomes] |
| rs4692605 | 0.84[AFR][1000 genomes] |
| rs4692828 | 0.84[AFR][1000 genomes] |
| rs4692831 | 0.84[AFR][1000 genomes] |
| rs6553513 | 0.84[AFR][1000 genomes] |
| rs6553517 | 0.82[AFR][1000 genomes] |
| rs6553518 | 0.82[AFR][1000 genomes] |
| rs6815451 | 0.84[AFR][1000 genomes] |
| rs6826287 | 0.84[AFR][1000 genomes] |
| rs7655336 | 0.84[AFR][1000 genomes] |
| rs7655750 | 0.84[AFR][1000 genomes] |
| rs7656816 | 0.84[AFR][1000 genomes] |
| rs7665189 | 0.84[AFR][1000 genomes] |
| rs7665574 | 0.84[AFR][1000 genomes] |
| rs7685794 | 0.84[AFR][1000 genomes] |
| rs9684346 | 0.84[AFR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:171296000-171306400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
