Variant report

Variant rs13116668
Chromosome Location chr4:3497010-3497011
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:3487200-3506800 Weak transcription Psoas Muscle Psoas
2 chr4:3487400-3497800 Weak transcription Right Atrium heart
3 chr4:3487800-3501800 Weak transcription Gastric stomach
4 chr4:3488600-3507600 Weak transcription Primary B cells from cord blood blood
5 chr4:3489800-3506800 Weak transcription Brain Angular Gyrus brain
6 chr4:3491000-3510200 Weak transcription HMEC breast
7 chr4:3492800-3497400 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
8 chr4:3493400-3497200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr4:3493400-3498200 Bivalent Enhancer Fetal Muscle Trunk muscle
10 chr4:3494200-3533200 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr4:3494800-3509000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr4:3495000-3497600 Enhancers Fetal Intestine Large intestine
13 chr4:3495200-3501600 Enhancers Fetal Heart heart
14 chr4:3495400-3497200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
15 chr4:3495400-3498200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr4:3495600-3502000 Weak transcription Aorta Aorta
17 chr4:3495600-3504600 Weak transcription HSMMtube muscle
18 chr4:3495600-3507400 Weak transcription Primary hematopoietic stem cells blood
19 chr4:3495800-3499200 Genic enhancers Right Ventricle heart
20 chr4:3496000-3497200 Enhancers Brain Anterior Caudate brain
21 chr4:3496000-3498400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr4:3496000-3500600 Weak transcription Spleen Spleen
23 chr4:3496200-3498000 Enhancers Left Ventricle heart
24 chr4:3496200-3498000 Bivalent Enhancer HepG2 liver
25 chr4:3496200-3498200 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
26 chr4:3496200-3498400 Bivalent Enhancer Placenta Placenta
27 chr4:3496400-3497400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr4:3496400-3503000 Weak transcription Primary B cells from peripheral blood blood
29 chr4:3496600-3497800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr4:3496600-3501000 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr4:3496600-3502200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr4:3496600-3504000 Weak transcription Brain Inferior Temporal Lobe brain
33 chr4:3496600-3504400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr4:3496600-3510200 Weak transcription NH-A brain
35 chr4:3496800-3497600 Strong transcription Fetal Muscle Leg muscle
36 chr4:3496800-3500600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr4:3496800-3500600 Weak transcription Lung lung
38 chr4:3496800-3504200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr4:3496800-3505400 Weak transcription HSMM muscle
40 chr4:3496800-3510200 Weak transcription Placenta Amnion Placenta Amnion
41 chr4:3497000-3497200 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
42 chr4:3497000-3497200 Enhancers Pancreas Pancrea
43 chr4:3497000-3497600 Genic enhancers Fetal Intestine Small intestine
44 chr4:3497000-3499200 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr4:3497000-3502400 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr4:3497000-3504200 Weak transcription Muscle Satellite Cultured Cells --
47 chr4:3497000-3504600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr4:3497000-3505000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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