Variant report

Variant rs13124681
Chromosome Location chr4:57972174-57972175
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:57956800-57974400 Weak transcription Monocytes-CD14+_RO01746 blood
2 chr4:57957000-57974600 Weak transcription Primary hematopoietic stem cells blood
3 chr4:57957200-57975200 Weak transcription Primary neutrophils fromperipheralblood blood
4 chr4:57958200-57975200 Weak transcription Primary monocytes fromperipheralblood blood
5 chr4:57958200-57975400 Weak transcription Small Intestine intestine
6 chr4:57959800-57973400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
7 chr4:57964000-57973200 Weak transcription Duodenum Mucosa Duodenum
8 chr4:57964200-57972200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr4:57964600-57973200 Weak transcription Pancreas Pancrea
10 chr4:57965600-57972600 Weak transcription Thymus Thymus
11 chr4:57966200-57975200 Weak transcription Lung lung
12 chr4:57967800-57972600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr4:57967800-57973200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr4:57968000-57973000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr4:57969600-57972400 Weak transcription Fetal Thymus thymus
16 chr4:57969600-57972400 Weak transcription Ovary ovary
17 chr4:57969600-57972400 Weak transcription Spleen Spleen
18 chr4:57969600-57973200 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr4:57969600-57973200 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr4:57969600-57973200 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr4:57969600-57974800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr4:57969600-57975000 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr4:57969600-57975400 Weak transcription Colonic Mucosa Colon
24 chr4:57969800-57972600 Weak transcription Fetal Heart heart
25 chr4:57969800-57975400 Weak transcription Fetal Lung lung
26 chr4:57970200-57974400 Weak transcription Fetal Stomach stomach
27 chr4:57970400-57975600 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr4:57970600-57973200 Weak transcription Fetal Muscle Leg muscle
29 chr4:57970800-57972600 Genic enhancers HSMMtube muscle
30 chr4:57970800-57973200 Strong transcription Primary hematopoietic stem cells short term culture blood
31 chr4:57970800-57973600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr4:57971000-57972200 Genic enhancers NHEK skin
33 chr4:57971000-57972400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr4:57971000-57973000 Genic enhancers Osteobl bone
35 chr4:57971000-57973400 Enhancers NHDF-Ad bronchial
36 chr4:57971000-57973800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr4:57971200-57972200 Enhancers Colon Smooth Muscle Colon
38 chr4:57971200-57973000 Genic enhancers Muscle Satellite Cultured Cells --
39 chr4:57971200-57973200 Enhancers Right Ventricle heart
40 chr4:57971400-57972200 Weak transcription Left Ventricle heart
41 chr4:57971400-57972400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr4:57971400-57972400 Weak transcription Right Atrium heart
43 chr4:57971400-57972800 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr4:57971400-57973200 Enhancers Fetal Kidney kidney
45 chr4:57971400-57973400 Weak transcription Adipose Nuclei Adipose
46 chr4:57971400-57976200 Active TSS Stomach Smooth Muscle stomach
47 chr4:57971600-57972400 Weak transcription Aorta Aorta
48 chr4:57971600-57973200 Weak transcription Brain Substantia Nigra brain
49 chr4:57971600-57973200 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr4:57971600-57973200 Weak transcription Skeletal Muscle Female skeletal muscle

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