The 2.0 version of rSNPBase

Variant report

Variant rs131274
Chromosome Location chr22:30153864-30153865
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:30131600-30162000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr22:30134400-30158400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr22:30136000-30154800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr22:30141600-30154200 Weak transcription Osteobl bone
5 chr22:30141800-30155400 Strong transcription Fetal Stomach stomach
6 chr22:30143600-30154200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr22:30144400-30161800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr22:30144400-30162000 Weak transcription Placenta Placenta
9 chr22:30144400-30162200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr22:30144600-30160000 Weak transcription Dnd41 blood
11 chr22:30144600-30161800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr22:30144600-30161800 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr22:30144600-30161800 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr22:30144600-30162000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr22:30144800-30155000 Weak transcription Ovary ovary
16 chr22:30144800-30161800 Weak transcription Primary B cells from peripheral blood blood
17 chr22:30144800-30161800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr22:30144800-30161800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr22:30145200-30154000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr22:30145400-30154200 Weak transcription NHDF-Ad bronchial
21 chr22:30146000-30161800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr22:30146400-30155000 Weak transcription Brain Substantia Nigra brain
23 chr22:30146600-30154800 Weak transcription Left Ventricle heart
24 chr22:30146600-30161800 Weak transcription Brain Germinal Matrix brain
25 chr22:30146800-30154800 Weak transcription Brain Cingulate Gyrus brain
26 chr22:30146800-30161800 Weak transcription Brain Anterior Caudate brain
27 chr22:30146800-30161800 Weak transcription Right Ventricle heart
28 chr22:30147000-30162000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr22:30147000-30162200 Weak transcription Gastric stomach
30 chr22:30147400-30154000 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr22:30147400-30160200 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr22:30147400-30160200 Weak transcription HepG2 liver
33 chr22:30147400-30161800 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr22:30147600-30161800 Weak transcription Primary B cells from cord blood blood
35 chr22:30147600-30161800 Weak transcription NHEK skin
36 chr22:30147600-30162200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr22:30147800-30160200 Weak transcription Fetal Thymus thymus
38 chr22:30147800-30160800 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr22:30147800-30161800 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr22:30148200-30160000 Weak transcription Primary monocytes fromperipheralblood blood
41 chr22:30148200-30161600 Weak transcription Primary T cells fromperipheralblood blood
42 chr22:30148200-30162000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr22:30148400-30161800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr22:30149000-30161600 Weak transcription Pancreas Pancrea
45 chr22:30149200-30161800 Weak transcription Fetal Intestine Large intestine
46 chr22:30150400-30161400 Weak transcription Thymus Thymus
47 chr22:30150400-30161800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr22:30150400-30161800 Weak transcription Brain Inferior Temporal Lobe brain
49 chr22:30150400-30162000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr22:30150600-30154000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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Last update: Aug 31, 2015