The 2.0 version of rSNPBase

Variant report

Variant rs13133003
Chromosome Location chr4:88386238-88386239
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:88344400-88398600 Weak transcription Gastric stomach
2 chr4:88345200-88400000 Weak transcription Rectal Smooth Muscle rectum
3 chr4:88345200-88416400 Weak transcription Colonic Mucosa Colon
4 chr4:88346600-88410400 Weak transcription Esophagus oesophagus
5 chr4:88351600-88414600 Weak transcription Psoas Muscle Psoas
6 chr4:88352600-88387200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr4:88365000-88403400 Weak transcription Right Ventricle heart
8 chr4:88372600-88398800 Weak transcription Lung lung
9 chr4:88372800-88386400 Weak transcription HSMM muscle
10 chr4:88372800-88398800 Weak transcription Brain Anterior Caudate brain
11 chr4:88373800-88397000 Weak transcription Aorta Aorta
12 chr4:88373800-88397200 Weak transcription Brain Cingulate Gyrus brain
13 chr4:88373800-88397600 Weak transcription Brain Hippocampus Middle brain
14 chr4:88373800-88409800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr4:88374000-88441000 Weak transcription Spleen Spleen
16 chr4:88375800-88409400 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr4:88376200-88398200 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr4:88378000-88410400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr4:88379200-88394600 Weak transcription Fetal Muscle Trunk muscle
20 chr4:88379400-88387200 Weak transcription Placenta Placenta
21 chr4:88379400-88393800 Weak transcription Left Ventricle heart
22 chr4:88379600-88398200 Weak transcription Fetal Stomach stomach
23 chr4:88379600-88409400 Weak transcription Fetal Intestine Small intestine
24 chr4:88379800-88396000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr4:88380200-88386400 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr4:88380200-88386800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr4:88380400-88386800 Weak transcription Fetal Kidney kidney
28 chr4:88380400-88388800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr4:88380400-88388800 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr4:88380400-88394200 Weak transcription Fetal Lung lung
31 chr4:88380400-88394400 Weak transcription Stomach Smooth Muscle stomach
32 chr4:88380400-88397000 Weak transcription Brain Inferior Temporal Lobe brain
33 chr4:88380400-88397600 Weak transcription Colon Smooth Muscle Colon
34 chr4:88380400-88398800 Weak transcription Brain Substantia Nigra brain
35 chr4:88380400-88402400 Weak transcription Liver Liver
36 chr4:88380400-88410000 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr4:88380400-88419600 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr4:88380600-88387800 Weak transcription Pancreas Pancrea
39 chr4:88380600-88390800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr4:88380600-88394200 Weak transcription Adipose Nuclei Adipose
41 chr4:88380600-88396200 Weak transcription Fetal Muscle Leg muscle
42 chr4:88380600-88398600 Weak transcription Ovary ovary
43 chr4:88380600-88400000 Weak transcription Fetal Intestine Large intestine
44 chr4:88380600-88400600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr4:88380600-88419400 Weak transcription Duodenum Mucosa Duodenum
46 chr4:88381000-88398200 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr4:88381600-88394000 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr4:88381800-88395000 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr4:88381800-88400200 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr4:88382200-88386600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015