Variant report

Variant rs13148226
Chromosome Location chr4:7829982-7829983
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:7808600-7830000 Weak transcription H9 Cell Line embryonic stem cell
2 chr4:7818000-7830000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr4:7819800-7834400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
4 chr4:7821000-7830400 Weak transcription Esophagus oesophagus
5 chr4:7821200-7859000 Weak transcription Aorta Aorta
6 chr4:7823800-7830200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr4:7824600-7834600 Genic enhancers HUVEC blood vessel
8 chr4:7825400-7839400 Weak transcription Pancreas Pancrea
9 chr4:7825600-7830000 Weak transcription Brain Substantia Nigra brain
10 chr4:7825600-7830400 Weak transcription Small Intestine intestine
11 chr4:7825600-7830600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr4:7825600-7830800 Weak transcription Psoas Muscle Psoas
13 chr4:7825600-7852200 Weak transcription Gastric stomach
14 chr4:7825800-7830200 Weak transcription Fetal Brain Male brain
15 chr4:7825800-7854200 Weak transcription Brain Inferior Temporal Lobe brain
16 chr4:7826000-7846000 Weak transcription Stomach Mucosa stomach
17 chr4:7826400-7833600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr4:7826600-7830200 Weak transcription Brain Anterior Caudate brain
19 chr4:7826600-7842400 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr4:7826800-7831200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr4:7827000-7831400 Weak transcription HepG2 liver
22 chr4:7827600-7832400 Genic enhancers Fetal Muscle Leg muscle
23 chr4:7827800-7830800 Enhancers Placenta Placenta
24 chr4:7827800-7831000 Genic enhancers Fetal Stomach stomach
25 chr4:7828000-7830200 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr4:7828000-7830400 Genic enhancers Fetal Muscle Trunk muscle
27 chr4:7828000-7830600 Genic enhancers ES-I3 Cell Line embryonic stem cell
28 chr4:7828000-7832400 Genic enhancers Cortex derived primary cultured neurospheres brain
29 chr4:7828200-7830200 Strong transcription A549 lung
30 chr4:7828200-7831000 Strong transcription Brain Germinal Matrix brain
31 chr4:7828600-7830200 Weak transcription Colonic Mucosa Colon
32 chr4:7828800-7830800 Enhancers Primary Natural Killer cells fromperipheralblood blood
33 chr4:7828800-7833000 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr4:7828800-7833600 Weak transcription ES-WA7 Cell Line embryonic stem cell
35 chr4:7829000-7834200 Enhancers Primary T cells fromperipheralblood blood
36 chr4:7829200-7833400 Enhancers Primary T helper cells fromperipheralblood blood
37 chr4:7829400-7830000 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr4:7829400-7830200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
39 chr4:7829400-7830400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
40 chr4:7829400-7830400 Enhancers Right Ventricle heart
41 chr4:7829400-7830400 Genic enhancers Stomach Smooth Muscle stomach
42 chr4:7829400-7830600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
43 chr4:7829400-7830600 Enhancers Primary monocytes fromperipheralblood blood
44 chr4:7829400-7830600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
45 chr4:7829400-7830600 Genic enhancers Adipose Nuclei Adipose
46 chr4:7829400-7830600 Genic enhancers Colon Smooth Muscle Colon
47 chr4:7829400-7830600 Enhancers Duodenum Smooth Muscle Duodenum
48 chr4:7829400-7830600 Enhancers Fetal Thymus thymus
49 chr4:7829400-7830800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr4:7829400-7830800 Enhancers Brain Angular Gyrus brain

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