The 2.0 version of rSNPBase

Variant report

Variant rs1316452
Chromosome Location chr7:105406000-105406001
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:105359800-105406200 Weak transcription Gastric stomach
2 chr7:105359800-105438600 Weak transcription Pancreas Pancrea
3 chr7:105360800-105406200 Weak transcription Fetal Muscle Leg muscle
4 chr7:105364600-105416400 Weak transcription Brain Angular Gyrus brain
5 chr7:105367200-105428800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr7:105379400-105416200 Weak transcription Left Ventricle heart
7 chr7:105382600-105410400 Weak transcription Right Atrium heart
8 chr7:105384600-105438600 Weak transcription Spleen Spleen
9 chr7:105385000-105434800 Weak transcription Monocytes-CD14+_RO01746 blood
10 chr7:105386600-105416600 Weak transcription Right Ventricle heart
11 chr7:105389000-105432400 Weak transcription Esophagus oesophagus
12 chr7:105389200-105410400 Weak transcription Aorta Aorta
13 chr7:105389800-105408800 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr7:105392800-105407000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr7:105392800-105407000 Weak transcription Fetal Muscle Trunk muscle
16 chr7:105392800-105409000 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr7:105393200-105410000 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr7:105393400-105409000 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr7:105393800-105411000 Weak transcription Brain Cingulate Gyrus brain
20 chr7:105393800-105428600 Weak transcription Brain Hippocampus Middle brain
21 chr7:105397000-105410000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr7:105399400-105407400 Weak transcription Fetal Intestine Large intestine
23 chr7:105399400-105408800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr7:105399400-105409000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr7:105399400-105413600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr7:105399600-105406200 Weak transcription Adipose Nuclei Adipose
27 chr7:105400200-105407800 Weak transcription Ovary ovary
28 chr7:105400200-105410400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr7:105400600-105438400 Weak transcription Duodenum Mucosa Duodenum
30 chr7:105400800-105410200 Weak transcription Fetal Kidney kidney
31 chr7:105400800-105436800 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr7:105401000-105410000 Weak transcription Rectal Smooth Muscle rectum
33 chr7:105401200-105406400 Weak transcription Fetal Brain Female brain
34 chr7:105401200-105406400 Weak transcription Fetal Lung lung
35 chr7:105401200-105407000 Weak transcription Stomach Smooth Muscle stomach
36 chr7:105401200-105409200 Weak transcription H1 Cell Line embryonic stem cell
37 chr7:105401200-105409200 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr7:105401200-105409600 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr7:105401200-105410200 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr7:105401400-105410200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr7:105401400-105410200 Weak transcription Osteobl bone
42 chr7:105401600-105406400 Weak transcription NH-A brain
43 chr7:105401800-105406400 Weak transcription Fetal Stomach stomach
44 chr7:105401800-105407600 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr7:105401800-105410600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr7:105401800-105416000 Weak transcription Fetal Intestine Small intestine
47 chr7:105402200-105409600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr7:105402200-105410600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr7:105402600-105406400 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr7:105402600-105409200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015