Variant report

Variant rs13215091
Chromosome Location chr6:31528690-31528691
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31516000-31535800 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr6:31516400-31533200 Weak transcription Fetal Brain Male brain
3 chr6:31516600-31529200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr6:31516800-31530800 Weak transcription Stomach Mucosa stomach
5 chr6:31516800-31531000 Weak transcription Fetal Kidney kidney
6 chr6:31521000-31529200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr6:31523800-31529000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr6:31523800-31529000 Strong transcription Dnd41 blood
9 chr6:31523800-31529200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
10 chr6:31523800-31529400 Strong transcription Brain Germinal Matrix brain
11 chr6:31524200-31529200 Strong transcription Fetal Brain Female brain
12 chr6:31525200-31529000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
13 chr6:31525200-31529200 Genic enhancers Fetal Muscle Leg muscle
14 chr6:31525400-31529000 Strong transcription H9 Cell Line embryonic stem cell
15 chr6:31525400-31529000 Enhancers Right Atrium heart
16 chr6:31525400-31529200 Genic enhancers Skeletal Muscle Female skeletal muscle
17 chr6:31525600-31529000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
18 chr6:31525800-31529200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
19 chr6:31526000-31529000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr6:31526000-31529200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr6:31526000-31529200 Genic enhancers Brain Dorsolateral Prefrontal Cortex brain
22 chr6:31526200-31528800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr6:31526200-31529000 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr6:31526200-31529000 Enhancers NH-A brain
25 chr6:31526200-31529000 Enhancers NHDF-Ad bronchial
26 chr6:31526200-31529200 Flanking Active TSS Primary B cells from cord blood blood
27 chr6:31526400-31529000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr6:31526400-31529000 Enhancers HSMMtube muscle
29 chr6:31526400-31529400 Strong transcription Fetal Stomach stomach
30 chr6:31526400-31532600 Weak transcription Fetal Lung lung
31 chr6:31526600-31529000 Enhancers Psoas Muscle Psoas
32 chr6:31526800-31528800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr6:31526800-31529000 Enhancers ES-WA7 Cell Line embryonic stem cell
34 chr6:31526800-31529000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr6:31526800-31529400 Weak transcription Ovary ovary
36 chr6:31526800-31530200 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr6:31527000-31528800 Enhancers Primary mononuclear cells fromperipheralblood Blood
38 chr6:31527000-31529000 Genic enhancers Thymus Thymus
39 chr6:31527000-31529200 Strong transcription Stomach Smooth Muscle stomach
40 chr6:31527000-31529200 Flanking Active TSS GM12878-XiMat blood
41 chr6:31527000-31529200 Genic enhancers K562 blood
42 chr6:31527000-31529800 Genic enhancers Fetal Thymus thymus
43 chr6:31527200-31528800 Genic enhancers HUES64 Cell Line embryonic stem cell
44 chr6:31527200-31529200 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr6:31527200-31530000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr6:31527400-31535400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr6:31527400-31535400 Weak transcription HepG2 liver
48 chr6:31527600-31528800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
49 chr6:31527600-31529000 Enhancers Osteobl bone
50 chr6:31527600-31529200 Genic enhancers Brain Anterior Caudate brain

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