Variant report

Variant	rs13227668
Chromosome Location	chr7:18868745-18868746
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498112	chr7:18677922-18991946	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv887813	chr7:18720135-18995552	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv887814	chr7:18751998-18886177	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:18854000-18874400	Weak transcription	Aorta	Aorta
2	chr7:18866200-18869000	Weak transcription	Osteobl	bone
3	chr7:18866800-18885200	Weak transcription	Primary B cells from cord blood	blood
4	chr7:18867200-18882400	Weak transcription	Left Ventricle	heart
5	chr7:18867800-18870000	Enhancers	HSMM	muscle
6	chr7:18868000-18869000	Enhancers	Fetal Muscle Leg	muscle
7	chr7:18868000-18869400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr7:18868000-18869600	Enhancers	Rectal Mucosa Donor 31	rectum
9	chr7:18868000-18870000	Enhancers	Fetal Stomach	stomach
10	chr7:18868200-18869800	Enhancers	Rectal Mucosa Donor 29	rectum
11	chr7:18868200-18870000	Enhancers	Muscle Satellite Cultured Cells	--
12	chr7:18868200-18870400	Enhancers	Rectal Smooth Muscle	rectum
13	chr7:18868200-18879400	Weak transcription	HSMMtube	muscle
14	chr7:18868400-18868800	Enhancers	Hela-S3	cervix
15	chr7:18868400-18869200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr7:18868400-18869600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr7:18868400-18870000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr7:18868400-18870000	Flanking Active TSS	NHDF-Ad	bronchial
19	chr7:18868400-18870400	Enhancers	Colon Smooth Muscle	Colon
20	chr7:18868600-18868800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
21	chr7:18868600-18869200	Enhancers	Esophagus	oesophagus
22	chr7:18868600-18869400	Flanking Active TSS	Adipose Nuclei	Adipose
23	chr7:18868600-18870200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr7:18868600-18870400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr7:18868600-18870600	Enhancers	Fetal Kidney	kidney

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