Variant report

Variant	rs13241574
Chromosome Location	chr7:109191437-109191438
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs13241557	0.84[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023379	chr7:109003574-109355234	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv608079	chr7:109098364-109862289	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:109187800-109191600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr7:109187800-109192200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr7:109187800-109198000	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr7:109188000-109199200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr7:109188000-109211000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr7:109189000-109191600	Enhancers	Brain Germinal Matrix	brain
7	chr7:109189200-109192400	Weak transcription	Aorta	Aorta
8	chr7:109189400-109192000	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
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