Variant report

Variant	rs13263790
Chromosome Location	chr8:67325258-67325259
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10435613	0.85[EUR][1000 genomes]
rs10435614	0.85[EUR][1000 genomes]
rs12541243	0.95[EUR][1000 genomes]
rs12674507	0.95[EUR][1000 genomes]
rs13259712	0.95[EUR][1000 genomes]
rs13274386	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs13278628	0.85[EUR][1000 genomes]
rs34469344	0.85[EUR][1000 genomes]
rs35150383	0.85[EUR][1000 genomes]
rs35403851	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35502468	0.95[EUR][1000 genomes]
rs35929661	0.95[EUR][1000 genomes]
rs3739336	0.95[EUR][1000 genomes]
rs66815352	0.95[EUR][1000 genomes]
rs6991180	0.95[EUR][1000 genomes]
rs71515015	1.00[AMR][1000 genomes]
rs71515016	0.85[AMR][1000 genomes]
rs8180970	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67317400-67330400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr8:67319800-67330400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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