Variant report

Variant	rs13297691
Chromosome Location	chr9:92684200-92684201
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:92206823..92209475-chr9:92684160..92686501,2	MCF-7	breast:
2	chr9:92218872..92221885-chr9:92684149..92688442,4	MCF-7	breast:
3	chr9:92217841..92222641-chr9:92679830..92688712,19	MCF-7	breast:
4	chr9:92682411..92684734-chr9:92700082..92701810,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000130222	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv15329	chr9:92678855-92698160	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3399737	chr9:92682932-92687130	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92679600-92685000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr9:92680000-92685600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr9:92680400-92685000	Weak transcription	Pancreas	Pancrea
4	chr9:92681600-92691600	Weak transcription	Right Atrium	heart
5	chr9:92681800-92684200	Weak transcription	Fetal Heart	heart
6	chr9:92681800-92685400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr9:92681800-92686000	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr9:92681800-92686200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr9:92681800-92686200	Weak transcription	Fetal Intestine Large	intestine
10	chr9:92681800-92686200	Weak transcription	Fetal Intestine Small	intestine
11	chr9:92681800-92686200	Weak transcription	Placenta	Placenta
12	chr9:92681800-92686200	Weak transcription	Left Ventricle	heart
13	chr9:92681800-92689000	Weak transcription	Right Ventricle	heart
14	chr9:92682000-92685000	Weak transcription	Liver	Liver
15	chr9:92682000-92689200	Weak transcription	Lung	lung
16	chr9:92682600-92685000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr9:92683000-92684400	Weak transcription	Brain Inferior Temporal Lobe	brain
18	chr9:92683000-92684400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
19	chr9:92683600-92684400	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr9:92683800-92689200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
21	chr9:92684000-92684400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr9:92684200-92685200	Enhancers	Fetal Heart	heart

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