The 2.0 version of rSNPBase

Variant report

Variant rs13330054
Chromosome Location chr16:81906895-81906896
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:81876200-81918200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr16:81880000-81911200 Weak transcription Pancreas Pancrea
3 chr16:81880400-81908200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr16:81894800-81912400 Weak transcription Fetal Intestine Small intestine
5 chr16:81896800-81910400 Weak transcription Gastric stomach
6 chr16:81898800-81907400 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr16:81898800-81912400 Weak transcription Duodenum Mucosa Duodenum
8 chr16:81899000-81934600 Weak transcription Right Atrium heart
9 chr16:81900800-81925000 Weak transcription Rectal Smooth Muscle rectum
10 chr16:81901000-81907800 Weak transcription Liver Liver
11 chr16:81901000-81929200 Weak transcription Brain Substantia Nigra brain
12 chr16:81901200-81911200 Weak transcription Lung lung
13 chr16:81901200-81925000 Weak transcription Adipose Nuclei Adipose
14 chr16:81902600-81908000 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr16:81902800-81955600 Weak transcription Fetal Kidney kidney
16 chr16:81903200-81907400 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr16:81903200-81910000 Weak transcription Spleen Spleen
18 chr16:81904400-81916800 Weak transcription Fetal Intestine Large intestine
19 chr16:81905000-81907200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
20 chr16:81905800-81943000 Weak transcription Small Intestine intestine
21 chr16:81906000-81908400 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr16:81906000-81909600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr16:81906200-81907200 Weak transcription Primary monocytes fromperipheralblood blood
24 chr16:81906200-81907800 Enhancers Primary T cells fromperipheralblood blood
25 chr16:81906200-81908400 Genic enhancers Primary B cells from peripheral blood blood
26 chr16:81906200-81908400 Genic enhancers Primary hematopoietic stem cells short term culture blood
27 chr16:81906200-81908400 Genic enhancers GM12878-XiMat blood
28 chr16:81906400-81908000 Enhancers HUVEC blood vessel
29 chr16:81906400-81908400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
30 chr16:81906400-81908400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr16:81906600-81907000 Weak transcription Primary hematopoietic stem cells blood
32 chr16:81906600-81907600 Enhancers Fetal Thymus thymus
33 chr16:81906600-81907800 Enhancers Primary neutrophils fromperipheralblood blood
34 chr16:81906600-81908000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
35 chr16:81906600-81908000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr16:81906600-81908200 Enhancers Primary T killer memory cells from peripheral blood blood
37 chr16:81906800-81907200 Enhancers Primary T helper cells PMA-I stimulated --
38 chr16:81906800-81907200 Enhancers Primary T helper cells fromperipheralblood blood
39 chr16:81906800-81908000 Weak transcription Monocytes-CD14+_RO01746 blood
40 chr16:81906800-81908600 Enhancers Primary B cells from cord blood blood

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Last update: Aug 31, 2015