The 2.0 version of rSNPBase

Variant report

Variant rs13330920
Chromosome Location chr16:80650768-80650769
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:80630600-80668000 Weak transcription Fetal Kidney kidney
2 chr16:80634200-80663600 Weak transcription Brain Anterior Caudate brain
3 chr16:80635000-80651200 Weak transcription Brain Hippocampus Middle brain
4 chr16:80635400-80655600 Weak transcription Brain Angular Gyrus brain
5 chr16:80636800-80653600 Weak transcription HSMMtube muscle
6 chr16:80637000-80653400 Weak transcription HSMM muscle
7 chr16:80639800-80657400 Weak transcription Stomach Smooth Muscle stomach
8 chr16:80640600-80652600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr16:80640600-80662200 Weak transcription Primary T cells from cord blood blood
10 chr16:80640600-80662600 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr16:80640800-80663800 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr16:80640800-80669200 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr16:80641800-80652200 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr16:80642200-80652200 Weak transcription Primary T cells fromperipheralblood blood
15 chr16:80642200-80668200 Weak transcription Brain Inferior Temporal Lobe brain
16 chr16:80642800-80663800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr16:80643000-80654600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr16:80644200-80666200 Weak transcription Brain Substantia Nigra brain
19 chr16:80645200-80652800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr16:80645400-80657600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr16:80645600-80652800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr16:80646000-80653600 Weak transcription Fetal Intestine Large intestine
23 chr16:80646000-80656000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr16:80646200-80651000 Enhancers Placenta Placenta
25 chr16:80646400-80657800 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr16:80646400-80662200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr16:80646400-80662200 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr16:80646600-80650800 Weak transcription Liver Liver
29 chr16:80646600-80651400 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr16:80646600-80652000 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr16:80646600-80652600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr16:80646600-80653200 Weak transcription Lung lung
33 chr16:80646600-80654800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr16:80646600-80657800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr16:80646600-80687800 Weak transcription Pancreas Pancrea
36 chr16:80646800-80653000 Weak transcription Adipose Nuclei Adipose
37 chr16:80647000-80652400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr16:80647000-80653000 Weak transcription Duodenum Mucosa Duodenum
39 chr16:80647000-80665000 Weak transcription Gastric stomach
40 chr16:80648400-80653200 Weak transcription Esophagus oesophagus
41 chr16:80649000-80650800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr16:80649000-80651200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr16:80649200-80653400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr16:80649400-80652600 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr16:80649400-80653400 Weak transcription NHEK skin
46 chr16:80649400-80654400 Strong transcription Spleen Spleen
47 chr16:80649600-80657800 Weak transcription Primary hematopoietic stem cells blood
48 chr16:80649600-80658000 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr16:80650000-80651200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr16:80650000-80652600 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015