Variant report

Variant rs13338008
Chromosome Location chr16:79802404-79802405
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:79792800-79804000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr16:79798400-79802800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr16:79800600-79803400 Weak transcription Gastric stomach
4 chr16:79801200-79804200 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr16:79801400-79803600 Enhancers Fetal Thymus thymus
6 chr16:79801400-79805000 Enhancers Placenta Amnion Placenta Amnion
7 chr16:79801600-79802800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr16:79801600-79802800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr16:79801600-79802800 Flanking Active TSS Brain Substantia Nigra brain
10 chr16:79801600-79803000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr16:79801600-79803000 Flanking Active TSS Fetal Lung lung
12 chr16:79801600-79803200 Flanking Active TSS Adipose Nuclei Adipose
13 chr16:79801600-79804000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr16:79801600-79804000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr16:79801600-79804000 Enhancers Primary hematopoietic stem cells blood
16 chr16:79801600-79804000 Enhancers Esophagus oesophagus
17 chr16:79801600-79804000 Enhancers Fetal Kidney kidney
18 chr16:79801600-79804000 Enhancers Placenta Placenta
19 chr16:79801600-79804000 Enhancers Sigmoid Colon Sigmoid Colon
20 chr16:79801600-79804400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr16:79801800-79802600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr16:79801800-79802600 Flanking Active TSS Muscle Satellite Cultured Cells --
23 chr16:79801800-79802600 Active TSS Brain Inferior Temporal Lobe brain
24 chr16:79801800-79802600 Active TSS Colonic Mucosa Colon
25 chr16:79801800-79802600 Flanking Active TSS NHEK skin
26 chr16:79801800-79802800 Enhancers H1 Cell Line embryonic stem cell
27 chr16:79801800-79802800 Enhancers HUES6 Cell Line embryonic stem cell
28 chr16:79801800-79802800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
29 chr16:79801800-79802800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
30 chr16:79801800-79802800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr16:79801800-79802800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr16:79801800-79802800 Flanking Active TSS Brain Anterior Caudate brain
33 chr16:79801800-79802800 Flanking Active TSS Fetal Intestine Small intestine
34 chr16:79801800-79802800 Flanking Active TSS HMEC breast
35 chr16:79801800-79803200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr16:79801800-79803800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr16:79801800-79803800 Enhancers Thymus Thymus
38 chr16:79801800-79804000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
39 chr16:79801800-79804000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr16:79802000-79802600 Active TSS Breast Myoepithelial Primary Cells Breast
41 chr16:79802000-79802600 Flanking Active TSS Brain Cingulate Gyrus brain
42 chr16:79802000-79802600 Active TSS Pancreatic Islets Pancreatic Islet
43 chr16:79802000-79802600 Active TSS Right Atrium heart
44 chr16:79802000-79802600 Active TSS Skeletal Muscle Male skeletal muscle
45 chr16:79802000-79802800 Enhancers iPS-20b Cell Line embryonic stem cell
46 chr16:79802000-79802800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
47 chr16:79802000-79802800 Flanking Active TSS HSMM muscle
48 chr16:79802000-79803600 Enhancers Fetal Brain Female brain
49 chr16:79802000-79803600 Weak transcription Fetal Heart heart
50 chr16:79802000-79803800 Enhancers Brain Germinal Matrix brain

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