Variant report

Variant rs13345174
Chromosome Location chr19:28220060-28220061
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:28209400-28224200 Weak transcription HSMMtube muscle
2 chr19:28213800-28221400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr19:28214200-28225400 Weak transcription Muscle Satellite Cultured Cells --
4 chr19:28215000-28221200 Weak transcription Left Ventricle heart
5 chr19:28215400-28222600 ZNF genes & repeats A549 lung
6 chr19:28215800-28228400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr19:28216000-28220200 Weak transcription Stomach Smooth Muscle stomach
8 chr19:28216000-28221200 Weak transcription Aorta Aorta
9 chr19:28216000-28235800 Weak transcription HSMM muscle
10 chr19:28217000-28237600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr19:28217400-28221000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
12 chr19:28217600-28221000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
13 chr19:28217600-28221800 ZNF genes & repeats Adipose Nuclei Adipose
14 chr19:28217600-28224200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr19:28217600-28225000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr19:28217600-28229800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
17 chr19:28218000-28226800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr19:28218600-28224000 Weak transcription Colon Smooth Muscle Colon
19 chr19:28218600-28228400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr19:28218600-28235600 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr19:28218800-28221400 Weak transcription Ovary ovary
22 chr19:28218800-28227000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
23 chr19:28219200-28225200 ZNF genes & repeats Liver Liver
24 chr19:28219400-28228200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr19:28219600-28220800 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
26 chr19:28219600-28221000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr19:28219800-28220800 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
28 chr19:28220000-28222600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin

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