Variant report

Variant	rs13360791
Chromosome Location	chr5:94323268-94323269
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs55682625	1.00[ASN][1000 genomes]
rs66789646	1.00[ASN][1000 genomes]
rs66816988	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs67223139	1.00[ASN][1000 genomes]
rs67482451	0.98[ASN][1000 genomes]
rs722722	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[TSI][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72777358	1.00[ASN][1000 genomes]
rs72777361	1.00[ASN][1000 genomes]
rs72777365	1.00[ASN][1000 genomes]
rs72777369	1.00[ASN][1000 genomes]
rs73138010	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs977577	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs977578	0.82[CHB][hapmap];0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs998822	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2756469	chr5:94323268-94400017	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94301200-94337600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr5:94313800-94337000	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr5:94314000-94325400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr5:94319800-94346600	Weak transcription	HUVEC	blood vessel
5	chr5:94320400-94348000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr5:94321400-94323800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr5:94322400-94334200	Weak transcription	Gastric	stomach
8	chr5:94323000-94324000	Strong transcription	Primary hematopoietic stem cells	blood
9	chr5:94323200-94324400	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr5:94323200-94326200	Strong transcription	Monocytes-CD14+_RO01746	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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