The 2.0 version of rSNPBase

Variant report

Variant rs1336753
Chromosome Location chr1:185249214-185249215
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185193800-185263600 Weak transcription Brain Inferior Temporal Lobe brain
2 chr1:185210600-185250400 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr1:185218800-185269400 Weak transcription Pancreas Pancrea
4 chr1:185227800-185262000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:185228800-185250400 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr1:185231000-185263400 Weak transcription Fetal Kidney kidney
7 chr1:185234000-185253200 Weak transcription Fetal Heart heart
8 chr1:185235000-185261800 Weak transcription Duodenum Mucosa Duodenum
9 chr1:185235200-185256800 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr1:185235400-185265400 Weak transcription Brain Substantia Nigra brain
11 chr1:185236600-185265600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:185238800-185253200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr1:185239600-185249600 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr1:185239600-185262000 Weak transcription HSMMtube muscle
15 chr1:185239800-185250400 Weak transcription Liver Liver
16 chr1:185239800-185262000 Weak transcription Fetal Muscle Leg muscle
17 chr1:185239800-185263800 Weak transcription Brain Anterior Caudate brain
18 chr1:185240000-185265800 Weak transcription Fetal Lung lung
19 chr1:185240200-185267200 Weak transcription Gastric stomach
20 chr1:185240400-185268800 Weak transcription Aorta Aorta
21 chr1:185240800-185250400 Weak transcription Adipose Nuclei Adipose
22 chr1:185240800-185273000 Weak transcription Spleen Spleen
23 chr1:185241400-185250600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr1:185241600-185261800 Weak transcription Fetal Brain Female brain
25 chr1:185242000-185262000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:185244000-185261400 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr1:185244800-185264800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:185245400-185268800 Weak transcription Esophagus oesophagus
29 chr1:185245600-185249800 Weak transcription Fetal Muscle Trunk muscle
30 chr1:185245600-185261000 Weak transcription Fetal Intestine Large intestine
31 chr1:185245800-185249600 Weak transcription Brain Germinal Matrix brain
32 chr1:185245800-185249800 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr1:185245800-185261600 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr1:185245800-185268400 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr1:185245800-185273000 Weak transcription Right Ventricle heart
36 chr1:185246000-185253400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr1:185246000-185254000 Weak transcription Placenta Amnion Placenta Amnion
38 chr1:185246200-185261600 Weak transcription Lung lung
39 chr1:185246400-185249400 Weak transcription Primary T cells fromperipheralblood blood
40 chr1:185246800-185249600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr1:185246800-185249800 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr1:185246800-185265600 Weak transcription NHLF lung
43 chr1:185247000-185249600 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr1:185247200-185249400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:185247400-185253800 Weak transcription Fetal Intestine Small intestine
46 chr1:185247600-185267800 Weak transcription Fetal Stomach stomach
47 chr1:185247800-185256600 Weak transcription Ovary ovary
48 chr1:185248000-185249600 Weak transcription Left Ventricle heart
49 chr1:185248000-185249800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
50 chr1:185248000-185250000 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015