Variant report

Variant	rs1337421
Chromosome Location	chr6:102064344-102064345
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs2518253	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv538392	chr6:101938381-102148360	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3384771	chr6:101996253-102283808	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:102060400-102065400	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr6:102061600-102064600	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr6:102061800-102065200	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr6:102062400-102064600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
5	chr6:102063200-102064800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
6	chr6:102063400-102064800	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr6:102063600-102065400	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr6:102064200-102065200	Weak transcription	iPS-18 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links