Variant report

Variant rs13375853
Chromosome Location chr1:228353781-228353782
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228352400-228354200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:228352400-228354200 Active TSS Thymus Thymus
3 chr1:228352600-228354000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:228352600-228354000 Active TSS Cortex derived primary cultured neurospheres brain
5 chr1:228352600-228354000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
6 chr1:228352600-228354200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
7 chr1:228352600-228354200 Active TSS Colonic Mucosa Colon
8 chr1:228352600-228354200 Active TSS Rectal Mucosa Donor 29 rectum
9 chr1:228352600-228354200 Active TSS GM12878-XiMat blood
10 chr1:228352600-228354400 Active TSS iPS-20b Cell Line embryonic stem cell
11 chr1:228352600-228354400 Active TSS A549 lung
12 chr1:228352600-228354600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:228352600-228354800 Active TSS HSMM muscle
14 chr1:228352800-228354000 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
15 chr1:228352800-228354000 Active TSS Primary T helper naive cells from peripheral blood blood
16 chr1:228352800-228354000 Active TSS Brain Germinal Matrix brain
17 chr1:228352800-228354000 Active TSS Rectal Smooth Muscle rectum
18 chr1:228352800-228354200 Active TSS ES-WA7 Cell Line embryonic stem cell
19 chr1:228352800-228354200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:228352800-228354200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr1:228352800-228354200 Active TSS HUES6 Cell Line embryonic stem cell
22 chr1:228352800-228354200 Active TSS iPS-18 Cell Line embryonic stem cell
23 chr1:228352800-228354200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr1:228352800-228354200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:228352800-228354200 Active TSS Primary T helper memory cells from peripheral blood 2 blood
26 chr1:228352800-228354200 Active TSS Primary T killer memory cells from peripheral blood blood
27 chr1:228352800-228354200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
28 chr1:228352800-228354200 Active TSS Brain Angular Gyrus brain
29 chr1:228352800-228354200 Active TSS Brain Anterior Caudate brain
30 chr1:228352800-228354200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
31 chr1:228352800-228354200 Active TSS Brain Substantia Nigra brain
32 chr1:228352800-228354200 Active TSS Colon Smooth Muscle Colon
33 chr1:228352800-228354200 Active TSS Fetal Lung lung
34 chr1:228352800-228354200 Active TSS Pancreas Pancrea
35 chr1:228352800-228354200 Active TSS HepG2 liver
36 chr1:228352800-228354200 Active TSS HSMMtube muscle
37 chr1:228352800-228354200 Active TSS NHDF-Ad bronchial
38 chr1:228352800-228354400 Active TSS ES-I3 Cell Line embryonic stem cell
39 chr1:228352800-228354400 Active TSS H1 Cell Line embryonic stem cell
40 chr1:228352800-228354400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr1:228352800-228354400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
42 chr1:228352800-228354400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
43 chr1:228352800-228354400 Active TSS Breast Myoepithelial Primary Cells Breast
44 chr1:228352800-228354400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
45 chr1:228352800-228354400 Active TSS Aorta Aorta
46 chr1:228352800-228354400 Active TSS Brain Hippocampus Middle brain
47 chr1:228352800-228354400 Active TSS Left Ventricle heart
48 chr1:228352800-228354400 Active TSS Ovary ovary
49 chr1:228352800-228354400 Active TSS Psoas Muscle Psoas
50 chr1:228352800-228354400 Active TSS Hela-S3 cervix

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