Variant report

Variant	rs13377219
Chromosome Location	chr11:83466265-83466266
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83465597..83467714-chr11:83469852..83471903,2	K562	blood:

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10501547	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11233735	1.00[EUR][1000 genomes]
rs11233740	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11820299	1.00[EUR][1000 genomes]
rs11821437	1.00[EUR][1000 genomes]
rs11827203	1.00[EUR][1000 genomes]
rs12272853	1.00[EUR][1000 genomes]
rs12280860	1.00[EUR][1000 genomes]
rs12283296	1.00[EUR][1000 genomes]
rs17145930	1.00[EUR][1000 genomes]
rs17146000	1.00[EUR][1000 genomes]
rs17146020	1.00[EUR][1000 genomes]
rs3892733	1.00[EUR][1000 genomes]
rs56414509	1.00[EUR][1000 genomes]
rs57384748	1.00[EUR][1000 genomes]
rs59776077	1.00[EUR][1000 genomes]
rs61440361	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7119373	1.00[EUR][1000 genomes]
rs73509276	1.00[EUR][1000 genomes]
rs7928392	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3495715	chr11:83463604-83468952	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
2	esv2589653	chr11:83463955-83468471	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
3	esv3495710	chr11:83464004-83468952	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
4	esv3495719	chr11:83464306-83468455	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
5	esv1959476	chr11:83464474-83468109	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
6	esv3463475	chr11:83464523-83468031	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
7	esv3495717	chr11:83464545-83468026	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
8	esv3463453	chr11:83464561-83468017	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv3495716	chr11:83464566-83468004	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv3495713	chr11:83464571-83467968	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
11	esv3463442	chr11:83464573-83467992	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
12	esv3463431	chr11:83464589-83467965	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
13	esv3495712	chr11:83464595-83467965	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
14	esv3495711	chr11:83464597-83467967	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
15	esv3463464	chr11:83464642-83467922	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
16	esv3495714	chr11:83464652-83467922	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
17	esv3463486	chr11:83464656-83467920	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
18	esv3495720	chr11:83464656-83467920	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
19	esv15304	chr11:83464992-83467903	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
20	esv2544219	chr11:83465802-83467802	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83460800-83471800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr11:83461200-83472000	Weak transcription	Brain Inferior Temporal Lobe	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links