The 2.0 version of rSNPBase

Variant report

Variant rs13383946
Chromosome Location chr2:231245925-231245926
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231212800-231253600 Weak transcription Gastric stomach
2 chr2:231212800-231253600 Weak transcription HMEC breast
3 chr2:231212800-231259200 Weak transcription Small Intestine intestine
4 chr2:231212800-231262400 Weak transcription K562 blood
5 chr2:231220000-231275800 Weak transcription Stomach Mucosa stomach
6 chr2:231222200-231253400 Weak transcription Colonic Mucosa Colon
7 chr2:231222200-231273200 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr2:231223200-231253600 Weak transcription NHLF lung
9 chr2:231223400-231257800 Weak transcription NH-A brain
10 chr2:231223600-231263600 Weak transcription Fetal Kidney kidney
11 chr2:231224200-231254000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr2:231225200-231268000 Weak transcription Colon Smooth Muscle Colon
13 chr2:231226600-231253800 Weak transcription Fetal Stomach stomach
14 chr2:231226800-231249800 Weak transcription Lung lung
15 chr2:231226800-231253600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr2:231226800-231253600 Weak transcription Pancreas Pancrea
17 chr2:231227000-231251400 Weak transcription HSMMtube muscle
18 chr2:231228800-231260000 Strong transcription Primary B cells from peripheral blood blood
19 chr2:231228800-231275600 Weak transcription Psoas Muscle Psoas
20 chr2:231231600-231246600 Strong transcription Primary T helper cells PMA-I stimulated --
21 chr2:231232200-231260400 Weak transcription Fetal Lung lung
22 chr2:231234200-231249600 Weak transcription Primary neutrophils fromperipheralblood blood
23 chr2:231234200-231253600 Weak transcription Esophagus oesophagus
24 chr2:231234200-231274400 Weak transcription Brain Hippocampus Middle brain
25 chr2:231234400-231259400 Weak transcription Fetal Intestine Small intestine
26 chr2:231236000-231251600 Weak transcription NHDF-Ad bronchial
27 chr2:231236800-231249400 Weak transcription Aorta Aorta
28 chr2:231236800-231250200 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr2:231236800-231251600 Weak transcription Rectal Smooth Muscle rectum
30 chr2:231236800-231260000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr2:231237000-231249200 Weak transcription Fetal Intestine Large intestine
32 chr2:231237000-231249800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr2:231237000-231249800 Weak transcription Muscle Satellite Cultured Cells --
34 chr2:231237000-231251800 Weak transcription HUVEC blood vessel
35 chr2:231237000-231253600 Weak transcription GM12878-XiMat blood
36 chr2:231237000-231264800 Weak transcription HepG2 liver
37 chr2:231237200-231246000 Weak transcription Thymus Thymus
38 chr2:231237200-231249400 Weak transcription Fetal Thymus thymus
39 chr2:231237200-231264800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr2:231238000-231253800 Weak transcription Fetal Muscle Leg muscle
41 chr2:231238200-231249400 Weak transcription Stomach Smooth Muscle stomach
42 chr2:231238200-231253600 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr2:231238200-231253600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr2:231238200-231257600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr2:231238400-231246200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr2:231238400-231249200 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr2:231238400-231249800 Weak transcription Osteobl bone
48 chr2:231238600-231246200 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr2:231238600-231249800 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr2:231238600-231253600 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015