Variant report

No.	Distal block	Cell Line	Cell type
1	chr2:30453108..30455029-chr2:30524913..30528459,3	K562	blood:
2	chr2:30527123..30530066-chr2:30531842..30534218,2	K562	blood:
3	chr2:30453108..30454928-chr2:30526019..30528459,2	K562	blood:

Variant related genes	Relation type
ENSG00000213626	Chromatin interaction

rSNPs within LD-proxies of this variant (count:4)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533886	chr2:30130019-31068764	ZNF genes & repeats Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
2	nsv833648	chr2:30505882-30696275	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
3	nsv2663	chr2:30522750-30567544	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:30523400-30528000	Weak transcription	K562	blood
2	chr2:30524000-30527800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr2:30524000-30527800	Weak transcription	Osteobl	bone
4	chr2:30524600-30534200	Weak transcription	Esophagus	oesophagus
5	chr2:30524600-30537400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr2:30524800-30533800	Weak transcription	Spleen	Spleen
7	chr2:30525000-30528200	Weak transcription	Stomach Mucosa	stomach
8	chr2:30525200-30527800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr2:30525200-30527800	Weak transcription	NH-A	brain
10	chr2:30525200-30532600	Weak transcription	Fetal Thymus	thymus
11	chr2:30525400-30527800	Weak transcription	NHDF-Ad	bronchial
12	chr2:30525400-30528200	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr2:30525400-30532600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr2:30525800-30528400	Weak transcription	A549	lung
15	chr2:30525800-30528400	Weak transcription	NHLF	lung
16	chr2:30526000-30533800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr2:30526600-30532600	Weak transcription	Fetal Heart	heart
18	chr2:30526800-30527800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr2:30526800-30529200	Weak transcription	Aorta	Aorta
20	chr2:30527200-30528600	Weak transcription	Primary T helper cells PMA-I stimulated	--

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