Variant report

Variant rs13391936
Chromosome Location chr2:54691545-54691546
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54685200-54694600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr2:54685200-54696600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:54685400-54696600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr2:54686400-54694000 Weak transcription Fetal Stomach stomach
5 chr2:54686400-54695600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr2:54686400-54697800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr2:54686600-54692200 Weak transcription Placenta Amnion Placenta Amnion
8 chr2:54686600-54692400 Weak transcription Osteobl bone
9 chr2:54686600-54694000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr2:54686600-54694000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr2:54686600-54695000 Enhancers Fetal Heart heart
12 chr2:54686600-54696200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr2:54686600-54696600 Weak transcription Lung lung
14 chr2:54686600-54696800 Weak transcription NH-A brain
15 chr2:54686600-54697000 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr2:54686600-54698600 Weak transcription H9 Cell Line embryonic stem cell
17 chr2:54687000-54691800 Weak transcription Primary hematopoietic stem cells blood
18 chr2:54687000-54700800 Weak transcription Brain Germinal Matrix brain
19 chr2:54687200-54692400 Weak transcription A549 lung
20 chr2:54687600-54692200 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr2:54687600-54696800 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr2:54688000-54691600 Enhancers HepG2 liver
23 chr2:54688000-54692600 Enhancers Adipose Nuclei Adipose
24 chr2:54688400-54691600 Enhancers Brain Anterior Caudate brain
25 chr2:54688400-54694600 Enhancers Colon Smooth Muscle Colon
26 chr2:54688600-54696200 Weak transcription Right Ventricle heart
27 chr2:54689200-54691800 Weak transcription Muscle Satellite Cultured Cells --
28 chr2:54689400-54693000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr2:54689400-54693800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr2:54689400-54694000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr2:54689400-54694000 Weak transcription NHLF lung
32 chr2:54689600-54693800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr2:54690200-54692400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr2:54690200-54692400 Weak transcription HSMM muscle
35 chr2:54690200-54694200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr2:54690400-54691600 Weak transcription Rectal Smooth Muscle rectum
37 chr2:54690400-54693800 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr2:54690400-54694000 Weak transcription HSMMtube muscle
39 chr2:54690600-54692200 Weak transcription NHDF-Ad bronchial
40 chr2:54690600-54692400 Weak transcription Brain Hippocampus Middle brain
41 chr2:54690600-54693800 Weak transcription Brain Angular Gyrus brain
42 chr2:54690600-54694200 Weak transcription Brain Inferior Temporal Lobe brain
43 chr2:54690600-54695200 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr2:54690600-54696600 Weak transcription Spleen Spleen
45 chr2:54690800-54691800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr2:54690800-54691800 Weak transcription Left Ventricle heart
47 chr2:54690800-54691800 Weak transcription Ovary ovary
48 chr2:54690800-54692000 Weak transcription Right Atrium heart
49 chr2:54690800-54692400 Weak transcription Psoas Muscle Psoas
50 chr2:54690800-54694000 Weak transcription Brain Cingulate Gyrus brain

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