Variant report

Variant	rs13395036
Chromosome Location	chr2:76958376-76958377
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10199769	1.00[YRI][hapmap]
rs11885586	1.00[EUR][1000 genomes]
rs11894844	1.00[EUR][1000 genomes]
rs13430399	1.00[YRI][hapmap]
rs1980199	1.00[EUR][1000 genomes]
rs7585191	1.00[EUR][1000 genomes]
rs869188	1.00[EUR][1000 genomes]
rs9973885	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv582235	chr2:76881210-76997763	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv874319	chr2:76949101-76979415	Weak transcription Enhancers Active TSS Strong transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:76957800-76958400	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr2:76957800-76958400	Enhancers	H9 Cell Line	embryonic stem cell
3	chr2:76958000-76958600	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr2:76958200-76958600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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