The 2.0 version of rSNPBase

Variant report

Variant rs13406026
Chromosome Location chr2:33781991-33781992
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33738600-33782800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr2:33740800-33790000 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr2:33748000-33790400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr2:33757200-33809800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr2:33760800-33782200 Weak transcription Brain Substantia Nigra brain
6 chr2:33760800-33783600 Weak transcription Brain Cingulate Gyrus brain
7 chr2:33761000-33789000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr2:33761200-33783800 Weak transcription Psoas Muscle Psoas
9 chr2:33762200-33809800 Weak transcription Aorta Aorta
10 chr2:33765600-33784400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr2:33766800-33809800 Weak transcription Rectal Smooth Muscle rectum
12 chr2:33772600-33791000 Strong transcription GM12878-XiMat blood
13 chr2:33772600-33793400 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr2:33774000-33790200 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr2:33775600-33783400 Weak transcription Stomach Smooth Muscle stomach
16 chr2:33776000-33809800 Weak transcription Pancreas Pancrea
17 chr2:33776200-33782800 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr2:33776800-33790600 Weak transcription Duodenum Mucosa Duodenum
19 chr2:33777800-33783000 Weak transcription ES-WA7 Cell Line embryonic stem cell
20 chr2:33778000-33783600 Weak transcription Fetal Intestine Small intestine
21 chr2:33778000-33785200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr2:33778200-33784800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr2:33778400-33796800 Weak transcription Liver Liver
24 chr2:33778400-33806400 Weak transcription Primary T cells from cord blood blood
25 chr2:33778400-33807600 Weak transcription NH-A brain
26 chr2:33778400-33808600 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr2:33779400-33783200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr2:33779600-33783800 Weak transcription Lung lung
29 chr2:33779800-33783600 Enhancers Fetal Heart heart
30 chr2:33780000-33808600 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr2:33780400-33782800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr2:33780400-33783000 Weak transcription Adipose Nuclei Adipose
33 chr2:33780400-33783000 Weak transcription Fetal Muscle Leg muscle
34 chr2:33780400-33783000 Weak transcription Right Ventricle heart
35 chr2:33780400-33783000 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr2:33780400-33783200 Weak transcription Fetal Stomach stomach
37 chr2:33780400-33783400 Weak transcription Spleen Spleen
38 chr2:33780400-33785800 Strong transcription Primary B cells from cord blood blood
39 chr2:33780400-33787600 Weak transcription Placenta Placenta
40 chr2:33780400-33808600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr2:33780400-33809200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr2:33780600-33782800 Weak transcription Left Ventricle heart
43 chr2:33780600-33783000 Weak transcription Right Atrium heart
44 chr2:33780600-33783800 Weak transcription NHDF-Ad bronchial
45 chr2:33780600-33785800 Weak transcription Fetal Muscle Trunk muscle
46 chr2:33780600-33787800 Weak transcription Brain Anterior Caudate brain
47 chr2:33780600-33789200 Weak transcription Ovary ovary
48 chr2:33780600-33790800 Strong transcription Primary B cells from peripheral blood blood
49 chr2:33780600-33791600 Weak transcription Primary hematopoietic stem cells blood
50 chr2:33780800-33783000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015