Variant report

Variant	rs13413197
Chromosome Location	chr2:212115918-212115919
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10497932	0.85[ASN][1000 genomes]
rs35085371	0.85[ASN][1000 genomes]
rs4673602	0.85[ASN][1000 genomes]
rs60214494	0.86[ASN][1000 genomes]
rs72945537	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834522	chr2:212066442-212225328	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212114400-212117200	Weak transcription	Liver	Liver
2	chr2:212115000-212116800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr2:212115400-212116000	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr2:212115600-212116000	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr2:212115600-212116000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr2:212115600-212116000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr2:212115600-212116200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr2:212115600-212116200	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr2:212115600-212116800	Enhancers	HUES64 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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