The 2.0 version of rSNPBase

Variant report

Variant rs13414765
Chromosome Location chr2:54173224-54173225
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54087200-54176000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
2 chr2:54087600-54187600 Weak transcription Stomach Mucosa stomach
3 chr2:54108200-54177400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr2:54109800-54179800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr2:54139200-54176600 Strong transcription Breast Myoepithelial Primary Cells Breast
6 chr2:54139200-54177000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr2:54139400-54176200 Strong transcription HUES64 Cell Line embryonic stem cell
8 chr2:54139600-54177000 Strong transcription HUES6 Cell Line embryonic stem cell
9 chr2:54143000-54177600 Strong transcription HepG2 liver
10 chr2:54143400-54176200 Strong transcription HMEC breast
11 chr2:54149800-54177000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:54151000-54189800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr2:54153200-54179800 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr2:54153400-54194600 Weak transcription Fetal Brain Male brain
15 chr2:54156600-54188000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr2:54156600-54190000 Weak transcription Spleen Spleen
17 chr2:54158600-54173600 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr2:54159200-54177000 Weak transcription Pancreas Pancrea
19 chr2:54159200-54177200 Weak transcription Right Ventricle heart
20 chr2:54159200-54188000 Weak transcription Colonic Mucosa Colon
21 chr2:54159200-54188000 Weak transcription Esophagus oesophagus
22 chr2:54159200-54188200 Weak transcription Small Intestine intestine
23 chr2:54159200-54189400 Weak transcription Aorta Aorta
24 chr2:54159200-54189800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr2:54159400-54195800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr2:54160000-54173600 Weak transcription Placenta Amnion Placenta Amnion
27 chr2:54160800-54173600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr2:54160800-54173600 Weak transcription Fetal Intestine Small intestine
29 chr2:54160800-54173800 Weak transcription Thymus Thymus
30 chr2:54160800-54177200 Weak transcription Lung lung
31 chr2:54160800-54179400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr2:54161600-54189800 Weak transcription Ovary ovary
33 chr2:54162800-54173400 Weak transcription Stomach Smooth Muscle stomach
34 chr2:54163400-54173600 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr2:54163400-54174000 Weak transcription Fetal Kidney kidney
36 chr2:54163600-54180400 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr2:54164000-54173600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr2:54164000-54176400 Weak transcription Fetal Brain Female brain
39 chr2:54164200-54177000 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr2:54164400-54173600 Weak transcription Brain Germinal Matrix brain
41 chr2:54164600-54173800 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr2:54164800-54176600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr2:54165600-54173400 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr2:54165600-54174000 Weak transcription Primary T killer memory cells from peripheral blood blood
45 chr2:54166400-54173400 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr2:54167000-54176400 Weak transcription NHEK skin
47 chr2:54167200-54173400 Weak transcription Fetal Muscle Leg muscle
48 chr2:54167600-54173400 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr2:54167600-54176400 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr2:54169000-54177400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015