The 2.0 version of rSNPBase

Variant report

Variant rs13415216
Chromosome Location chr2:234289786-234289787
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234264600-234290800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr2:234264600-234307600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr2:234264800-234292800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr2:234265000-234295000 Weak transcription Osteobl bone
5 chr2:234265200-234295000 Weak transcription NH-A brain
6 chr2:234265800-234293000 Weak transcription HMEC breast
7 chr2:234266000-234292400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr2:234266000-234292600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr2:234266000-234293000 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr2:234266400-234294000 Weak transcription Fetal Brain Male brain
11 chr2:234268400-234293400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr2:234269200-234293400 Weak transcription Right Atrium heart
13 chr2:234270000-234322400 Weak transcription Placenta Amnion Placenta Amnion
14 chr2:234272800-234313200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr2:234273000-234292200 Weak transcription Primary hematopoietic stem cells blood
16 chr2:234274000-234295200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr2:234275000-234289800 Weak transcription Pancreas Pancrea
18 chr2:234277200-234292600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr2:234277600-234322200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr2:234278600-234291400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr2:234278600-234292200 Weak transcription Ovary ovary
22 chr2:234278600-234292800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr2:234278600-234292800 Weak transcription Stomach Smooth Muscle stomach
24 chr2:234278600-234293000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr2:234278600-234293600 Weak transcription Colon Smooth Muscle Colon
26 chr2:234278600-234293800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr2:234278600-234294000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr2:234278600-234294000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr2:234278800-234293000 Weak transcription Brain Substantia Nigra brain
30 chr2:234279000-234292600 Weak transcription NHEK skin
31 chr2:234279000-234293000 Weak transcription Brain Cingulate Gyrus brain
32 chr2:234279200-234293200 Weak transcription Brain Hippocampus Middle brain
33 chr2:234279200-234293400 Weak transcription Brain Anterior Caudate brain
34 chr2:234279200-234293600 Weak transcription Rectal Smooth Muscle rectum
35 chr2:234279200-234294400 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr2:234280400-234294800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr2:234280600-234293200 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr2:234281800-234296600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr2:234282000-234291200 Weak transcription Fetal Muscle Leg muscle
40 chr2:234282000-234292000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr2:234282000-234292800 Weak transcription Brain Inferior Temporal Lobe brain
42 chr2:234282200-234289800 Weak transcription Adipose Nuclei Adipose
43 chr2:234282200-234293000 Weak transcription Gastric stomach
44 chr2:234282200-234293400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr2:234282200-234293600 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr2:234282400-234294400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr2:234282400-234298000 Weak transcription Dnd41 blood
48 chr2:234282600-234291000 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr2:234283400-234289800 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr2:234284000-234293800 Weak transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015