| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1002420 |
chr2:86948835-87172715 |
Weak transcription Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1008817 |
chr2:86970406-87172715 |
Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Genic enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
esv14382 |
chr2:86972214-87174121 |
Bivalent Enhancer Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Weak transcription Bivalent/Poised TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv997982 |
chr2:86972834-87105864 |
Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionmiRNA target site
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1007746 |
chr2:86972834-87172715 |
Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv458585 |
chr2:86974318-87108211 |
Flanking Active TSS Genic enhancers Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionmiRNA target site
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv582373 |
chr2:86974318-87108211 |
Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionmiRNA target site
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv532319 |
chr2:87024867-88005418 |
Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
34 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
esv1800069 |
chr2:87056027-87885905 |
Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
27 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv516466 |
chr2:87084916-87108211 |
Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv979032 |
chr2:87096093-87112321 |
Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page:
1
