Variant report

Variant rs13428453
Chromosome Location chr2:54534460-54534461
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54449800-54535200 Weak transcription Primary T cells from cord blood blood
2 chr2:54501600-54537600 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr2:54517600-54536800 Weak transcription Aorta Aorta
4 chr2:54517800-54537200 Weak transcription Brain Anterior Caudate brain
5 chr2:54526000-54535400 Weak transcription HSMMtube muscle
6 chr2:54533200-54534800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr2:54533200-54536000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr2:54533400-54534800 Enhancers Placenta Amnion Placenta Amnion
9 chr2:54533400-54536200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr2:54533800-54535200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr2:54533800-54535400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr2:54533800-54537200 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr2:54534000-54537200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr2:54534200-54536200 Enhancers NHEK skin
15 chr2:54534200-54537000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr2:54534200-54537400 Weak transcription HMEC breast
17 chr2:54534400-54535400 Weak transcription NH-A brain
18 chr2:54534400-54537200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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