Variant report

Variant rs13431159
Chromosome Location chr2:85815651-85815652
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:85812000-85816000 Enhancers Spleen Spleen
2 chr2:85812400-85816000 Enhancers Primary B cells from cord blood blood
3 chr2:85812400-85818600 Enhancers Placenta Placenta
4 chr2:85812400-85818600 Enhancers Lung lung
5 chr2:85812600-85815800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr2:85812600-85815800 Weak transcription Ovary ovary
7 chr2:85812600-85819200 Enhancers Fetal Muscle Leg muscle
8 chr2:85812600-85821200 Weak transcription Fetal Heart heart
9 chr2:85812800-85817200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr2:85812800-85817800 Enhancers NHLF lung
11 chr2:85812800-85818800 Enhancers Psoas Muscle Psoas
12 chr2:85812800-85819000 Enhancers Primary hematopoietic stem cells blood
13 chr2:85813000-85815800 Weak transcription Rectal Smooth Muscle rectum
14 chr2:85813000-85816400 Weak transcription Gastric stomach
15 chr2:85813000-85817000 Enhancers HepG2 liver
16 chr2:85813000-85817200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr2:85813000-85817200 Weak transcription Esophagus oesophagus
18 chr2:85813000-85817200 Weak transcription Placenta Amnion Placenta Amnion
19 chr2:85813000-85817400 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr2:85813000-85818200 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr2:85813000-85819600 Enhancers Primary monocytes fromperipheralblood blood
22 chr2:85813200-85815800 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr2:85813200-85816000 Weak transcription Brain Substantia Nigra brain
24 chr2:85813200-85817000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr2:85813200-85817200 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr2:85813200-85817400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr2:85813200-85817400 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr2:85813200-85817800 Enhancers Primary neutrophils fromperipheralblood blood
29 chr2:85813200-85817800 Enhancers Adipose Nuclei Adipose
30 chr2:85813200-85821400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr2:85813400-85816200 Enhancers Skeletal Muscle Male skeletal muscle
32 chr2:85813400-85816200 Weak transcription Osteobl bone
33 chr2:85813400-85816400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr2:85813400-85816400 Weak transcription NH-A brain
35 chr2:85813400-85817000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr2:85813400-85817200 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr2:85813400-85817200 Weak transcription HMEC breast
38 chr2:85813400-85817200 Weak transcription NHEK skin
39 chr2:85813400-85817400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr2:85813400-85817400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr2:85813400-85817400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr2:85813400-85818400 Enhancers Fetal Adrenal Gland Adrenal Gland
43 chr2:85813400-85819000 Enhancers Right Atrium heart
44 chr2:85813600-85821400 Weak transcription Fetal Intestine Large intestine
45 chr2:85813800-85820000 Weak transcription Fetal Intestine Small intestine
46 chr2:85814000-85816800 Enhancers K562 blood
47 chr2:85814000-85821600 Weak transcription Small Intestine intestine
48 chr2:85814200-85816200 Enhancers Fetal Thymus thymus
49 chr2:85814200-85816200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
50 chr2:85814200-85818800 Enhancers Duodenum Smooth Muscle Duodenum

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