The 2.0 version of rSNPBase

Variant report

Variant rs134611
Chromosome Location chr22:29476844-29476845
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:29470000-29477600 Weak transcription Aorta Aorta
2 chr22:29470400-29485800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr22:29470600-29478400 Weak transcription Gastric stomach
4 chr22:29470600-29478400 Weak transcription Pancreas Pancrea
5 chr22:29471400-29488000 Weak transcription Right Ventricle heart
6 chr22:29471800-29477000 Enhancers Fetal Thymus thymus
7 chr22:29472200-29477600 Weak transcription HepG2 liver
8 chr22:29472400-29489000 Weak transcription Fetal Intestine Small intestine
9 chr22:29473200-29481000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
10 chr22:29473400-29477600 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr22:29474000-29478000 Enhancers NHDF-Ad bronchial
12 chr22:29474000-29481400 Enhancers Fetal Lung lung
13 chr22:29474200-29477800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
14 chr22:29474200-29478800 Enhancers Fetal Brain Female brain
15 chr22:29474800-29477000 Enhancers Right Atrium heart
16 chr22:29474800-29478200 Enhancers Cortex derived primary cultured neurospheres brain
17 chr22:29474800-29478800 Enhancers Hela-S3 cervix
18 chr22:29474800-29480400 Enhancers Fetal Brain Male brain
19 chr22:29474800-29480600 Enhancers Ovary ovary
20 chr22:29475000-29489200 Weak transcription Fetal Intestine Large intestine
21 chr22:29475200-29477000 Enhancers Fetal Stomach stomach
22 chr22:29475200-29477000 Enhancers Rectal Mucosa Donor 31 rectum
23 chr22:29475200-29479000 Enhancers Adipose Nuclei Adipose
24 chr22:29475200-29480800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr22:29475200-29481000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr22:29475400-29477200 Enhancers Fetal Muscle Leg muscle
27 chr22:29475400-29477400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr22:29475400-29477400 Weak transcription Fetal Heart heart
29 chr22:29475400-29477800 Weak transcription Left Ventricle heart
30 chr22:29475400-29478400 Weak transcription Esophagus oesophagus
31 chr22:29475600-29477600 Weak transcription Stomach Mucosa stomach
32 chr22:29475600-29480400 Weak transcription Small Intestine intestine
33 chr22:29475600-29485200 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr22:29475600-29491000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr22:29475600-29505600 Weak transcription Spleen Spleen
36 chr22:29475800-29477000 Enhancers Thymus Thymus
37 chr22:29475800-29478600 Weak transcription K562 blood
38 chr22:29475800-29479800 Weak transcription Muscle Satellite Cultured Cells --
39 chr22:29476000-29477800 Weak transcription Duodenum Mucosa Duodenum
40 chr22:29476000-29478800 Enhancers Brain Germinal Matrix brain
41 chr22:29476000-29480200 Weak transcription HSMM muscle
42 chr22:29476200-29478400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr22:29476200-29478400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr22:29476200-29478800 Enhancers Fetal Adrenal Gland Adrenal Gland
45 chr22:29476200-29479000 Enhancers Liver Liver
46 chr22:29476400-29477000 Enhancers Placenta Amnion Placenta Amnion
47 chr22:29476400-29478000 Weak transcription ES-WA7 Cell Line embryonic stem cell
48 chr22:29476400-29478400 Enhancers Dnd41 blood
49 chr22:29476400-29487800 Weak transcription Brain Hippocampus Middle brain
50 chr22:29476400-29489600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015