Variant report

Variant	rs1349626
Chromosome Location	chr18:44087055-44087056
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1376079	0.97[ASN][1000 genomes]
rs1452277	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4890329	0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4890662	0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4890663	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4890664	0.90[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs4890666	0.83[ASN][1000 genomes]
rs6507702	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs1349626	HAUS1	cis	cerebellum	SCAN

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:44063200-44088400	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr18:44065000-44088000	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr18:44086000-44114400	Weak transcription	Spleen	Spleen
4	chr18:44086800-44090800	Strong transcription	Primary neutrophils fromperipheralblood	blood
5	chr18:44086800-44099200	Weak transcription	Right Ventricle	heart
6	chr18:44087000-44087200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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