Variant report

Variant rs136943
Chromosome Location chr22:27803409-27803410
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:27801600-27804000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr22:27801800-27803800 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr22:27801800-27804200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
4 chr22:27802400-27804000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr22:27802400-27804200 Enhancers NH-A brain
6 chr22:27802600-27804000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
7 chr22:27802600-27804000 Bivalent Enhancer Fetal Muscle Trunk muscle
8 chr22:27802600-27804400 Enhancers Brain Germinal Matrix brain
9 chr22:27802600-27804400 Enhancers Fetal Brain Male brain
10 chr22:27802800-27803800 Enhancers ES-WA7 Cell Line embryonic stem cell
11 chr22:27802800-27804000 Enhancers H1 Cell Line embryonic stem cell
12 chr22:27802800-27805600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr22:27803000-27803800 Flanking Active TSS Fetal Brain Female brain
14 chr22:27803000-27803800 Bivalent Enhancer Fetal Muscle Leg muscle
15 chr22:27803000-27804000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
16 chr22:27803000-27804000 Active TSS Brain Anterior Caudate brain
17 chr22:27803000-27804200 Enhancers ES-I3 Cell Line embryonic stem cell
18 chr22:27803000-27804200 Enhancers H9 Cell Line embryonic stem cell
19 chr22:27803000-27811600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr22:27803200-27803800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr22:27803200-27804000 Enhancers Cortex derived primary cultured neurospheres brain
22 chr22:27803200-27808400 Weak transcription NHEK skin
23 chr22:27803400-27803800 Enhancers HUES48 Cell Line embryonic stem cell
24 chr22:27803400-27804200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
25 chr22:27803400-27808400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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