The 2.0 version of rSNPBase

Variant report

Variant rs138084277
Chromosome Location chr11:58394548-58394549
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:58376600-58395800 Strong transcription Fetal Thymus thymus
2 chr11:58376600-58396200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr11:58376800-58395200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr11:58376800-58395600 Strong transcription Dnd41 blood
5 chr11:58377000-58394600 Strong transcription K562 blood
6 chr11:58377200-58394600 Strong transcription H1 Cell Line embryonic stem cell
7 chr11:58377200-58394800 Strong transcription iPS-18 Cell Line embryonic stem cell
8 chr11:58377200-58394800 Strong transcription Fetal Muscle Trunk muscle
9 chr11:58377200-58397200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr11:58377400-58394600 Strong transcription Primary hematopoietic stem cells blood
11 chr11:58377400-58394600 Strong transcription Fetal Intestine Large intestine
12 chr11:58377400-58394800 Strong transcription Primary T cells fromperipheralblood blood
13 chr11:58377400-58394800 Strong transcription Duodenum Mucosa Duodenum
14 chr11:58377400-58395200 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr11:58377600-58395200 Strong transcription Primary monocytes fromperipheralblood blood
16 chr11:58379000-58394600 Strong transcription Fetal Muscle Leg muscle
17 chr11:58381400-58395000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr11:58385200-58397000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr11:58385600-58400400 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr11:58386800-58400000 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr11:58388600-58395200 Strong transcription Fetal Adrenal Gland Adrenal Gland
22 chr11:58388800-58394600 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr11:58389800-58394600 Strong transcription Primary T helper cells PMA-I stimulated --
24 chr11:58390000-58394600 Strong transcription Primary T cells from cord blood blood
25 chr11:58390000-58395200 Strong transcription GM12878-XiMat blood
26 chr11:58391800-58394600 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr11:58391800-58397400 Genic enhancers HSMM muscle
28 chr11:58392000-58394600 Weak transcription HepG2 liver
29 chr11:58392000-58394800 Strong transcription HUES6 Cell Line embryonic stem cell
30 chr11:58392000-58396000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr11:58392000-58397000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr11:58392000-58406000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr11:58392200-58394600 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr11:58392200-58394600 Genic enhancers Muscle Satellite Cultured Cells --
35 chr11:58392200-58394600 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr11:58392200-58394800 Strong transcription HUES48 Cell Line embryonic stem cell
37 chr11:58392200-58394800 Strong transcription HUES64 Cell Line embryonic stem cell
38 chr11:58392200-58394800 Strong transcription iPS-20b Cell Line embryonic stem cell
39 chr11:58392200-58397600 Weak transcription Esophagus oesophagus
40 chr11:58392200-58399200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr11:58392200-58400800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr11:58392400-58395400 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr11:58392400-58397200 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr11:58392400-58402000 Weak transcription Fetal Intestine Small intestine
45 chr11:58392600-58394600 Genic enhancers HMEC breast
46 chr11:58392600-58394600 Genic enhancers Osteobl bone
47 chr11:58392600-58394800 Weak transcription Fetal Lung lung
48 chr11:58392600-58394800 Genic enhancers NHEK skin
49 chr11:58392600-58400600 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr11:58392800-58394600 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015