Variant report

Variant	rs138115271
Chromosome Location	chr16:81710240-81710241
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr16:81704516..81707348-chr16:81709106..81710744,2	MCF-7	breast:
2	chr16:81685696..81687477-chr16:81708078..81711074,2	K562	blood:
3	chr16:81709931..81712989-chr16:81713808..81717096,4	K562	blood:
4	chr16:81617511..81619449-chr16:81710211..81712244,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1058519	chr16:81177767-81735333	Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	36 gene(s)	inside rSNPs	diseases
2	nsv948448	chr16:81198147-81906766	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	37 gene(s)	inside rSNPs	diseases
3	nsv907011	chr16:81639190-81757252	Genic enhancers Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	9 gene(s)	inside rSNPs	diseases
4	esv3374261	chr16:81710051-81715149	Strong transcription Genic enhancers Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:81682400-81722400	Strong transcription	Monocytes-CD14+_RO01746	blood
2	chr16:81683600-81715600	Strong transcription	Primary T cells from cord blood	blood
3	chr16:81683800-81721800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
4	chr16:81684400-81722200	Strong transcription	Primary monocytes fromperipheralblood	blood
5	chr16:81684400-81722200	Strong transcription	Primary neutrophils fromperipheralblood	blood
6	chr16:81686600-81715400	Strong transcription	Placenta	Placenta
7	chr16:81686600-81721600	Weak transcription	NH-A	brain
8	chr16:81686600-81725000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr16:81688400-81736800	Weak transcription	NHDF-Ad	bronchial
10	chr16:81689400-81713800	Weak transcription	Right Atrium	heart
11	chr16:81689800-81722200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
12	chr16:81689800-81722400	Strong transcription	Fetal Intestine Large	intestine
13	chr16:81690600-81711000	Strong transcription	Adipose Nuclei	Adipose
14	chr16:81691200-81710400	Strong transcription	Sigmoid Colon	Sigmoid Colon
15	chr16:81691200-81721200	Strong transcription	Liver	Liver
16	chr16:81693400-81712800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr16:81695200-81712000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr16:81695200-81717000	Strong transcription	NHEK	skin
19	chr16:81695400-81712400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr16:81696000-81712200	Weak transcription	NHLF	lung
21	chr16:81696200-81710800	Weak transcription	Small Intestine	intestine
22	chr16:81696200-81712400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
23	chr16:81697400-81712400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
24	chr16:81698800-81721400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
25	chr16:81699200-81725600	Weak transcription	Osteobl	bone
26	chr16:81699400-81715400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr16:81699400-81726000	Weak transcription	Muscle Satellite Cultured Cells	--
28	chr16:81699800-81712400	Strong transcription	Duodenum Mucosa	Duodenum
29	chr16:81701000-81725200	Weak transcription	Aorta	Aorta
30	chr16:81701200-81722200	Strong transcription	Fetal Intestine Small	intestine
31	chr16:81702000-81714600	Strong transcription	Rectal Mucosa Donor 29	rectum
32	chr16:81702000-81715400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr16:81702200-81721800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
34	chr16:81702200-81722200	Strong transcription	HepG2	liver
35	chr16:81702600-81721600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr16:81703200-81722200	Strong transcription	Primary B cells from peripheral blood	blood
37	chr16:81703400-81715800	Strong transcription	Primary T helper cells fromperipheralblood	blood
38	chr16:81703400-81719000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr16:81703600-81712200	Strong transcription	Primary T cells fromperipheralblood	blood
40	chr16:81703600-81716000	Strong transcription	Primary B cells from cord blood	blood
41	chr16:81703800-81717000	Strong transcription	Fetal Thymus	thymus
42	chr16:81703800-81717200	Strong transcription	Thymus	Thymus
43	chr16:81704000-81711000	Weak transcription	HUVEC	blood vessel
44	chr16:81704000-81711200	Weak transcription	Stomach Mucosa	stomach
45	chr16:81704200-81724600	Weak transcription	Hela-S3	cervix
46	chr16:81705400-81712600	Strong transcription	A549	lung
47	chr16:81705600-81712400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
48	chr16:81706000-81712400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
49	chr16:81706000-81713600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
50	chr16:81706200-81711000	Weak transcription	H9 Cell Line	embryonic stem cell

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