Variant report

Variant	rs138137985
Chromosome Location	chrX:73562728-73562729
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3364045	chrX:72896383-73699363	Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	301 gene(s)	inside rSNPs	diseases
2	nsv916758	chrX:73546406-74420929	Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
3	nsv520605	chrX:73549327-73569476	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:73560200-73563000	Weak transcription	Monocytes-CD14+_RO01746	blood
2	chrX:73560400-73563000	Weak transcription	HUVEC	blood vessel
3	chrX:73560600-73562800	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chrX:73562200-73562800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chrX:73562400-73563600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chrX:73562600-73562800	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
7	chrX:73562600-73562800	Enhancers	Rectal Mucosa Donor 31	rectum
8	chrX:73562600-73564200	Enhancers	Stomach Mucosa	stomach
9	chrX:73562600-73564600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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