Variant report
| Variant | rs138246789 |
|---|---|
| Chromosome Location | chr6:150052782-150052783 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:150039800-150066800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 2 | chr6:150039800-150067000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 3 | chr6:150040000-150056400 | Weak transcription | Psoas Muscle | Psoas |
| 4 | chr6:150040000-150057400 | Weak transcription | A549 | lung |
| 5 | chr6:150040000-150066600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 6 | chr6:150040200-150056200 | Weak transcription | Colonic Mucosa | Colon |
| 7 | chr6:150040400-150066200 | Weak transcription | Fetal Brain Male | brain |
| 8 | chr6:150043600-150065600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 9 | chr6:150043600-150066000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 10 | chr6:150043800-150053800 | Strong transcription | Dnd41 | blood |
| 11 | chr6:150043800-150064000 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 12 | chr6:150044000-150065200 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 13 | chr6:150044000-150065400 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 14 | chr6:150044200-150058800 | Strong transcription | Fetal Muscle Trunk | muscle |
| 15 | chr6:150044200-150065000 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 16 | chr6:150044200-150065200 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 17 | chr6:150044600-150059200 | Strong transcription | Fetal Muscle Leg | muscle |
| 18 | chr6:150044800-150065000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 19 | chr6:150045400-150065600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 20 | chr6:150045800-150065400 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 21 | chr6:150046000-150053200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 22 | chr6:150046000-150064200 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 23 | chr6:150046200-150064600 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 24 | chr6:150046200-150064800 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 25 | chr6:150046600-150065000 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 26 | chr6:150046800-150064600 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 27 | chr6:150047000-150053000 | Strong transcription | HSMM | muscle |
| 28 | chr6:150047000-150053200 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 29 | chr6:150047200-150053400 | Strong transcription | HepG2 | liver |
| 30 | chr6:150047400-150053200 | Strong transcription | GM12878-XiMat | blood |
| 31 | chr6:150047400-150054800 | Strong transcription | Liver | Liver |
| 32 | chr6:150047600-150053000 | Strong transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 33 | chr6:150047600-150053200 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 34 | chr6:150047600-150053200 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 35 | chr6:150047600-150053400 | Strong transcription | Stomach Smooth Muscle | stomach |
| 36 | chr6:150047600-150058600 | Strong transcription | Duodenum Mucosa | Duodenum |
| 37 | chr6:150047800-150053000 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 38 | chr6:150047800-150053000 | Strong transcription | HUVEC | blood vessel |
| 39 | chr6:150047800-150053200 | Strong transcription | Left Ventricle | heart |
| 40 | chr6:150047800-150055000 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 41 | chr6:150047800-150055000 | Strong transcription | NH-A | brain |
| 42 | chr6:150047800-150058400 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 43 | chr6:150047800-150058800 | Strong transcription | H9 Cell Line | embryonic stem cell |
| 44 | chr6:150048400-150053200 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 45 | chr6:150048400-150056400 | Weak transcription | NHDF-Ad | bronchial |
| 46 | chr6:150048400-150066600 | Weak transcription | Fetal Heart | heart |
| 47 | chr6:150048800-150059200 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 48 | chr6:150048800-150064400 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 49 | chr6:150049000-150065600 | Strong transcription | Fetal Stomach | stomach |
| 50 | chr6:150049200-150053000 | Strong transcription | Brain Hippocampus Middle | brain |
