Variant report

Variant	rs138281117
Chromosome Location	chr5:180217024-180217025
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr5:180216899-180217395	MCF-7	breast:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217338-180217356 chr5:180217157-180217173
2	RAD21	chr5:180216802-180217402	H1-hESC	embryonic stem cell:	n/a	chr5:180217244-180217258 chr5:180217160-180217173 chr5:180217243-180217262 chr5:180217162-180217174 chr5:180217158-180217172 chr5:180217157-180217176
3	POLR2A	chr5:180216974-180217344	H1-hESC	embryonic stem cell:	n/a	n/a
4	POLR2A	chr5:180216869-180217503	GM12891	blood:	n/a	n/a
5	CTCF	chr5:180216980-180217130	NHLF	lung:	n/a	n/a
6	RAD21	chr5:180216925-180217491	HCT-116	colon:	n/a	chr5:180217244-180217258 chr5:180217160-180217173 chr5:180217243-180217262 chr5:180217162-180217174 chr5:180217158-180217172 chr5:180217157-180217176
7	POLR2A	chr5:180216889-180217420	GM12892	blood:	n/a	n/a
8	POLR2A	chr5:180216948-180217376	GM12891	blood:	n/a	n/a
9	CTCF	chr5:180216992-180217348	A549	lung:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217157-180217173
10	POLR2A	chr5:180216689-180217335	HepG2	liver:	n/a	n/a
11	CTCF	chr5:180216966-180217357	HepG2	liver:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217338-180217356 chr5:180217157-180217173
12	CTCF	chr5:180217020-180217170	HA-sp	spinal cord:	n/a	n/a
13	CTCF	chr5:180216991-180217331	MCF-7	breast:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217157-180217173
14	CTCF	chr5:180216922-180217401	H1-hESC	embryonic stem cell:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217338-180217356 chr5:180217157-180217173
15	POLR2A	chr5:180216926-180217410	HL-60	blood:	n/a	n/a
16	CTCF	chr5:180217011-180217333	MCF-7	breast:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217157-180217173
17	POLR2A	chr5:180216930-180217456	H1-hESC	embryonic stem cell:	n/a	n/a
18	POLR2A	chr5:180216842-180217435	GM12892	blood:	n/a	n/a
19	CTCF	chr5:180216802-180217546	A549	lung:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217338-180217356 chr5:180217157-180217173
20	POLR2A	chr5:180217011-180217447	K562	blood:	n/a	n/a
21	CTCF	chr5:180216927-180217439	H1-hESC	embryonic stem cell:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217338-180217356 chr5:180217157-180217173
22	CTCF	chr5:180217024-180217218	GM10266	blood:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217159-180217172 chr5:180217157-180217173
23	CTCF	chr5:180216880-180217030	AG09319	gingival:	n/a	n/a
24	RAD21	chr5:180216995-180217325	HepG2	liver:	n/a	chr5:180217244-180217258 chr5:180217160-180217173 chr5:180217243-180217262 chr5:180217162-180217174 chr5:180217158-180217172 chr5:180217157-180217176
25	CTCF	chr5:180217004-180217338	MCF-7	breast:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217157-180217173
26	CTCF	chr5:180217020-180217170	GM12867	blood:	n/a	n/a
27	CTCF	chr5:180217020-180217170	HMF	breast:	n/a	n/a
28	CTCF	chr5:180217000-180217150	HEEpiC	esophagus:	n/a	n/a
29	CTCF	chr5:180217020-180217170	A549	lung:	n/a	n/a
30	CTCF	chr5:180216912-180217304	A549	lung:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217157-180217173
31	POLR2A	chr5:180216883-180217109	K562	blood:	n/a	n/a
32	CTCF	chr5:180217020-180217170	GM12875	blood:	n/a	n/a
33	CTCF	chr5:180216980-180217130	GM12869	blood:	n/a	n/a
34	EBF1	chr5:180217009-180217312	GM12878	blood:	n/a	n/a
35	CTCF	chr5:180217020-180217170	GM06990	blood:	n/a	n/a
36	CTCF	chr5:180217020-180217170	HCT-116	colon:	n/a	n/a
37	POLR2A	chr5:180216939-180217469	GM12878	blood:	n/a	n/a
38	CTCF	chr5:180217019-180217325	MCF-7	breast:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217157-180217173
39	CTCF	chr5:180217000-180217331	GM12891	blood:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217157-180217173
40	CTCF	chr5:180216810-180217474	MCF-7	breast:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217338-180217356 chr5:180217157-180217173
41	CTCF	chr5:180217020-180217170	NHEK	skin:	n/a	n/a
42	RAD21	chr5:180216938-180217414	H1-hESC	embryonic stem cell:	n/a	chr5:180217244-180217258 chr5:180217160-180217173 chr5:180217243-180217262 chr5:180217162-180217174 chr5:180217158-180217172 chr5:180217157-180217176
43	POLR2A	chr5:180216973-180217270	HUVEC	blood vessel:	n/a	n/a
44	POLR2A	chr5:180217024-180217461	GM12878	blood:	n/a	n/a
45	POLR2A	chr5:180216946-180217464	K562	blood:	n/a	n/a
46	CTCF	chr5:180216991-180217346	H1-hESC	embryonic stem cell:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217157-180217173
47	CTCF	chr5:180216953-180217477	HCT-116	colon:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217338-180217356 chr5:180217157-180217173
48	CTCF	chr5:180217000-180217150	GM12872	blood:	n/a	n/a
49	CTCF	chr5:180217022-180217295	Hela-S3	cervix:	n/a	chr5:180217158-180217179 chr5:180217156-180217174 chr5:180217245-180217258 chr5:180217159-180217172 chr5:180217242-180217260 chr5:180217157-180217173
50	POLR2A	chr5:180216693-180217549	GM12878	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:180216985-180217035	Hela-S3	cervix:	n/a
2	chr5:180216985-180217035	SAEC	small airway:	n/a
3	chr5:180216985-180217035	PFSK-1	brain:	n/a
4	chr5:180216985-180217035	HRCEpiC	kidney:	n/a
5	chr5:180216985-180217035	GM06990	blood:	n/a
6	chr5:180216985-180217035	SK-N-SH	brain:	n/a
7	chr5:180216985-180217035	HCPEpiC	choroid plexus:	n/a
8	chr5:180216985-180217035	AG09319	gingival:	n/a
9	chr5:180216985-180217035	ovcar-3	ovarian:	n/a
10	chr5:180216985-180217035	NH-A	brain:	n/a
11	chr5:180216985-180217035	HEK293	kidney:	embryo
12	chr5:180216985-180217035	HEEpiC	esophagus:	n/a
13	chr5:180216985-180217035	HMEC	breast:	n/a
14	chr5:180216985-180217035	NHDF-neo	bronchial:	n/a
15	chr5:180216985-180217035	HL-60	blood:	n/a
16	chr5:180216985-180217035	HAEpiC	amniotic membrane:	n/a
17	chr5:180216985-180217035	AG04449	skin:	fetal
18	chr5:180216985-180217035	HPAEpiC	pulmonary alveolar:	n/a
19	chr5:180216985-180217035	GM12891	blood:	n/a
20	chr5:180216985-180217035	Jurkat	blood:	n/a
21	chr5:180216985-180217035	HUVEC	blood vessel:	n/a
22	chr5:180216985-180217035	HRPEpiC	eye:	n/a
23	chr5:180216985-180217035	SK-N-MC	brain:	n/a
24	chr5:180216985-180217035	HepG2	liver:	n/a
25	chr5:180216985-180217035	MCF10A-Er-Src	breast:	n/a
26	chr5:180216985-180217035	MCF-7	breast:	n/a
27	chr5:180216985-180217035	CMK	blood:	n/a
28	chr5:180216985-180217035	BJ	skin:	n/a
29	chr5:180216985-180217035	GM12878	blood:	n/a
30	chr5:180216985-180217035	GM12892	blood:	n/a
31	chr5:180216985-180217035	HCT-116	colon:	n/a
32	chr5:180216985-180217035	K562	blood:	n/a
33	chr5:180216985-180217035	ProgFib	skin:	n/a
34	chr5:180216985-180217035	Caco-2	colon:	n/a
35	chr5:180216985-180217035	NT2-D1	testis:	n/a
36	chr5:180216985-180217035	NB4	blood:	n/a
37	chr5:180216985-180217035	IMR90	lung:	fetal
38	chr5:180216985-180217035	AG10803	skin:	n/a
39	chr5:180216985-180217035	PrEC	prostate:	n/a
40	chr5:180216985-180217035	PANC-1	pancreas:	n/a
41	chr5:180216985-180217035	SK-N-SH_RA	brain:	n/a
42	chr5:180216985-180217035	HNPCEpiC	eye:	n/a
43	chr5:180216985-180217035	HCF	heart:	n/a
44	chr5:180216985-180217035	NHBE	bronchial:	n/a
45	chr5:180216985-180217035	AG04450	lung:	fetal
46	chr5:180216985-180217035	U87	brain:	n/a
47	chr5:180216985-180217035	HIPEpiC	eye:	n/a
48	chr5:180216985-180217035	BE2_C	brain:	n/a
49	chr5:180216985-180217035	HCM	heart:	n/a
50	chr5:180216985-180217035	GM19239	blood:	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:180216327..180219256-chr5:180485099..180486798,2	K562	blood:
2	chr5:180216578..180217657-chr5:180225674..180226614,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000260841	TF binding region
ENSG00000260841	CpG island

Extended variants
information (count: 47 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:47 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030697	chr5:179710469-180686563	ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Genic enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	184 gene(s)	inside rSNPs	diseases
2	nsv1026417	chr5:179721376-180291360	Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
3	nsv1031836	chr5:179742033-180676122	Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	177 gene(s)	inside rSNPs	diseases
4	nsv537984	chr5:179742033-180676122	Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	177 gene(s)	inside rSNPs	diseases
5	nsv949199	chr5:179743553-180696889	Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
6	nsv533204	chr5:180008319-180273638	Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Weak transcription Strong transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	69 gene(s)	inside rSNPs	diseases
7	nsv1015152	chr5:180014800-180567614	Enhancers Bivalent/Poised TSS Weak transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	89 gene(s)	inside rSNPs	diseases
8	nsv537987	chr5:180014800-180567614	Transcr. at gene 5' and 3' Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	89 gene(s)	inside rSNPs	diseases
9	nsv1034993	chr5:180059323-180686563	Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	161 gene(s)	inside rSNPs	diseases
10	nsv534263	chr5:180063182-180696806	Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	166 gene(s)	inside rSNPs	diseases
11	nsv1033330	chr5:180063241-180256969	Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
12	nsv537988	chr5:180063241-180256969	Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Weak transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
13	nsv1029282	chr5:180069992-180251755	Flanking Bivalent TSS/Enh Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
14	nsv1025669	chr5:180069992-180686563	Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	161 gene(s)	inside rSNPs	diseases
15	nsv1026991	chr5:180077614-180229093	Weak transcription Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
16	esv2757149	chr5:180079970-180245224	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
17	esv2759399	chr5:180079970-180281476	Genic enhancers Transcr. at gene 5' and 3' Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	65 gene(s)	inside rSNPs	diseases
18	esv2758033	chr5:180087198-180281476	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	65 gene(s)	inside rSNPs	diseases
19	nsv1024943	chr5:180108841-180226865	Weak transcription Transcr. at gene 5' and 3' Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
20	nsv1025777	chr5:180112337-180218662	Enhancers Strong transcription Genic enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
21	nsv537989	chr5:180112337-180218662	Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
22	nsv1032643	chr5:180112537-180218523	Enhancers Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
23	nsv537990	chr5:180112537-180218523	Genic enhancers Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
24	nsv1015329	chr5:180119301-180217029	Weak transcription Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
25	nsv537992	chr5:180119301-180217029	Enhancers Flanking Active TSS Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
26	nsv1030587	chr5:180119301-180229093	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
27	nsv537993	chr5:180119301-180686563	Weak transcription Active TSS Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	158 gene(s)	inside rSNPs	diseases
28	nsv1028106	chr5:180120010-180228163	Transcr. at gene 5' and 3' Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
29	esv2755731	chr5:180136233-180226673	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
30	nsv432822	chr5:180136233-180226673	Genic enhancers Transcr. at gene 5' and 3' Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
31	nsv1026978	chr5:180137823-180686563	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	157 gene(s)	inside rSNPs	diseases
32	nsv949443	chr5:180144688-180503368	Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	77 gene(s)	inside rSNPs	diseases
33	nsv1032677	chr5:180151997-180686563	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	157 gene(s)	inside rSNPs	diseases
34	nsv1016991	chr5:180152407-180256970	Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
35	nsv537994	chr5:180152407-180256970	Genic enhancers Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
36	nsv462587	chr5:180176005-180226673	Enhancers Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
37	nsv600678	chr5:180176005-180226673	Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
38	nsv469692	chr5:180185452-180360834	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	69 gene(s)	inside rSNPs	diseases
39	nsv482702	chr5:180185452-180360834	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	69 gene(s)	inside rSNPs	diseases
40	nsv1022107	chr5:180203044-180686563	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	155 gene(s)	inside rSNPs	diseases
41	nsv1033854	chr5:180208441-180686563	Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS Weak transcription ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	155 gene(s)	inside rSNPs	diseases
42	nsv537995	chr5:180208441-180686563	Active TSS Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	155 gene(s)	inside rSNPs	diseases
43	nsv1033472	chr5:180208501-180575682	Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	79 gene(s)	inside rSNPs	diseases
44	nsv537996	chr5:180208501-180575682	Flanking Active TSS Active TSS Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	79 gene(s)	inside rSNPs	diseases
45	nsv469788	chr5:180210102-180403232	Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
46	nsv482337	chr5:180210102-180403232	Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
47	nsv1018788	chr5:180216969-180686563	Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	155 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:180210000-180217800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
2	chr5:180210200-180217400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
3	chr5:180211200-180217400	Weak transcription	K562	blood
4	chr5:180212400-180225400	Strong transcription	Thymus	Thymus
5	chr5:180212800-180228600	Weak transcription	Fetal Brain Male	brain
6	chr5:180213000-180217600	Weak transcription	Hela-S3	cervix
7	chr5:180213800-180218000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
8	chr5:180214000-180217600	Weak transcription	Small Intestine	intestine
9	chr5:180214000-180219200	Genic enhancers	Placenta	Placenta
10	chr5:180214000-180221000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr5:180214200-180219000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr5:180214400-180220800	Strong transcription	Fetal Intestine Small	intestine
13	chr5:180214400-180222600	Weak transcription	Right Atrium	heart
14	chr5:180214400-180222800	Weak transcription	Stomach Mucosa	stomach
15	chr5:180214400-180223000	Strong transcription	Primary neutrophils fromperipheralblood	blood
16	chr5:180214400-180224400	Strong transcription	Monocytes-CD14+_RO01746	blood
17	chr5:180214600-180217200	Genic enhancers	Fetal Muscle Leg	muscle
18	chr5:180214600-180217600	Strong transcription	Primary T helper cells fromperipheralblood	blood
19	chr5:180214600-180217600	Weak transcription	NHEK	skin
20	chr5:180214600-180221000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
21	chr5:180214600-180223000	Strong transcription	Primary monocytes fromperipheralblood	blood
22	chr5:180214600-180223400	Strong transcription	Fetal Thymus	thymus
23	chr5:180214600-180224600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
24	chr5:180214600-180227000	Weak transcription	Fetal Kidney	kidney
25	chr5:180214800-180220000	Strong transcription	GM12878-XiMat	blood
26	chr5:180214800-180220400	Genic enhancers	Adipose Nuclei	Adipose
27	chr5:180214800-180220600	Strong transcription	Brain Germinal Matrix	brain
28	chr5:180214800-180220600	Strong transcription	Dnd41	blood
29	chr5:180214800-180220800	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
30	chr5:180214800-180222000	Strong transcription	Rectal Mucosa Donor 31	rectum
31	chr5:180214800-180226400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
32	chr5:180215000-180217400	Weak transcription	Brain Angular Gyrus	brain
33	chr5:180215000-180217400	Weak transcription	Rectal Smooth Muscle	rectum
34	chr5:180215000-180218400	Weak transcription	H9 Cell Line	embryonic stem cell
35	chr5:180215000-180218800	Strong transcription	Fetal Intestine Large	intestine
36	chr5:180215000-180219600	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr5:180215000-180220000	Strong transcription	Primary B cells from peripheral blood	blood
38	chr5:180215000-180220200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr5:180215000-180220400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr5:180215000-180220600	Strong transcription	Primary T cells from cord blood	blood
41	chr5:180215000-180220600	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
42	chr5:180215000-180220800	Strong transcription	Sigmoid Colon	Sigmoid Colon
43	chr5:180215000-180223600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
44	chr5:180215200-180217200	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
45	chr5:180215200-180217200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr5:180215200-180218000	Weak transcription	Brain Inferior Temporal Lobe	brain
47	chr5:180215200-180220200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr5:180215200-180220200	Strong transcription	Duodenum Mucosa	Duodenum
49	chr5:180215200-180222400	Strong transcription	Stomach Smooth Muscle	stomach
50	chr5:180215200-180222800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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